RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 MAP3K12Q12852 859 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 ZBTB21Q9ULJ3 1066 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 MYH1P12882 1939 aa18.51■□□□□ 0.55
DEPDC7-204ENST00000532078 C19orf81C9J6K1 198 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 H0YGN5 161 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 GDF11O95390 407 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 USP5P45974 858 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 UBE2Q1Q7Z7E8 422 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 MIGA1Q8NAN2 632 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
DEPDC7-204ENST00000532078 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 SGPL1O95470 568 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 JAG1P78504 1218 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 DPF3Q92784 378 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
DEPDC7-204ENST00000532078 SHROOM1Q2M3G4 852 aaPredicted RBP18.48■□□□□ 0.55
DEPDC7-204ENST00000532078 EHD4Q9H223 541 aa18.48■□□□□ 0.55
DEPDC7-204ENST00000532078 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
DEPDC7-204ENST00000532078 DDX60LQ5H9U9 1706 aaKnown RBP18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 HMGCRP04035 888 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 HERVK_113P62684 666 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 RHPN1Q8TCX5 695 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 ANTXR1Q9H6X2 564 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 SERPINB13Q9UIV8 391 aa18.47■□□□□ 0.55
DEPDC7-204ENST00000532078 NAV1Q8NEY1 1877 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 HMMRO75330 724 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 GH2P01242 217 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 CLASRPQ8N2M8 674 aaKnown RBP18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 GTF3C2Q8WUA4 911 aaPredicted RBP18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 TRIOBPQ9H2D6 2365 aa18.46■□□□□ 0.55
DEPDC7-204ENST00000532078 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L2Q6R6M4 530 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 GPRC5AQ8NFJ5 357 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 KIF1BPQ96EK5 621 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 P2RX7Q99572 595 aaKnown RBP18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 FEZ1Q99689 392 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 RYDENQ9NUL5 291 aaKnown RBP18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 NR2E3Q9Y5X4 410 aa18.45■□□□□ 0.54
DEPDC7-204ENST00000532078 PLXNB2O15031 1838 aa18.44■□□□□ 0.54
DEPDC7-204ENST00000532078 FXR1P51114 621 aaKnown RBP eCLIP18.44■□□□□ 0.54
DEPDC7-204ENST00000532078 SOCS4Q8WXH5 440 aa18.44■□□□□ 0.54
DEPDC7-204ENST00000532078 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
DEPDC7-204ENST00000532078 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
DEPDC7-204ENST00000532078 MAGEB6P1A0A0J9YX57 407 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 IFIT2P09913 472 aaKnown RBP18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 PDE6AP16499 860 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 MAPK4P31152 587 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 PDE3AQ14432 1141 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 CRNKL1Q9BZJ0 848 aaKnown RBP18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 TXNRD2Q9NNW7 524 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 RANBP2P49792 3224 aaKnown RBP18.43■□□□□ 0.54
DEPDC7-204ENST00000532078 APBB1O00213 710 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 USP14P54578 494 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 ERVK-9P63128 1117 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 ERVK-24P63145 666 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 ABCB5Q2M3G0 1257 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 CERKLQ49MI3 558 aaPredicted RBP18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 SLC9C2Q5TAH2 1124 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 NUDT12Q9BQG2 462 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 HMX1Q9NP08 348 aaPredicted RBP18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
DEPDC7-204ENST00000532078 GOLIM4O00461 696 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 RAB11FIP3O75154 756 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 ANKLE1Q8NAG6 615 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 DNAJC2Q99543 621 aaKnown RBP18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 PAGR1Q9BTK6 254 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 KIAA1683Q9H0B3 1180 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 CABP5Q9NP86 173 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 RBPJLQ9UBG7 517 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
DEPDC7-204ENST00000532078 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms