RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 NOP58Q9Y2X3 529 aaKnown RBP21.15■□□□□ 0.98
PKP3-208ENST00000531857 NAV1Q8NEY1 1877 aa21.15■□□□□ 0.98
PKP3-208ENST00000531857 IGSF3O75054 1194 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 USP5P45974 858 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 LRRC26Q2I0M4 334 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 LRIT3Q3SXY7 679 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 TDHQ8IZJ6 230 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 DEFB123Q8N688 67 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 MAGEB6Q8N7X4 407 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 C12orf42Q96LP6 360 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 FEZ1Q99689 392 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 UBE2OQ9C0C9 1292 aaKnown RBP21.14■□□□□ 0.97
PKP3-208ENST00000531857 FLRT1Q9NZU1 646 aa21.14■□□□□ 0.97
PKP3-208ENST00000531857 USP17L15C9J2P7 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L13C9JLJ4 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L11C9JVI0 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L18D6R9N7 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L22D6RA61 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L17D6RBQ6 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L19D6RCP7 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L20D6RJB6 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 USP17L24Q0WX57 530 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 MAP2K5Q13163 448 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 GPR153Q6NV75 609 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 ACER1Q8TDN7 264 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 ANTXR1Q9H6X2 564 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 RABGAP1Q9Y3P9 1069 aa21.13■□□□□ 0.97
PKP3-208ENST00000531857 RAB3GAP1Q15042 981 aa21.12■□□□□ 0.97
PKP3-208ENST00000531857 CATSPERGQ6ZRH7 1159 aa21.12■□□□□ 0.97
PKP3-208ENST00000531857 EDC3Q96F86 508 aaKnown RBP21.12■□□□□ 0.97
PKP3-208ENST00000531857 YTHDC1Q96MU7 727 aaKnown RBP21.12■□□□□ 0.97
PKP3-208ENST00000531857 EHD4Q9H223 541 aa21.12■□□□□ 0.97
PKP3-208ENST00000531857 CWC22Q9HCG8 908 aaKnown RBP21.12■□□□□ 0.97
PKP3-208ENST00000531857 MYH8P13535 1937 aa21.12■□□□□ 0.97
PKP3-208ENST00000531857 RLFQ13129 1914 aa21.12■□□□□ 0.97
PKP3-208ENST00000531857 CERKLQ49MI3 558 aaPredicted RBP21.11■□□□□ 0.97
PKP3-208ENST00000531857 KIAA1683Q9H0B3 1180 aa21.11■□□□□ 0.97
PKP3-208ENST00000531857 BTBD7Q9P203 1132 aa21.11■□□□□ 0.97
PKP3-208ENST00000531857 A0A0C4DFX4 3053 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 RLBP1P12271 317 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 VCAM1P19320 739 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 PLCD1P51178 756 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 MDM2Q00987 491 aaPredicted RBP21.1■□□□□ 0.97
PKP3-208ENST00000531857 ABCB5Q2M3G0 1257 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 WDR78Q5VTH9 848 aa21.1■□□□□ 0.97
PKP3-208ENST00000531857 PTPREP23469 700 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 GUCY1A2P33402 732 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 SHMT1P34896 483 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 USP14P54578 494 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 CCNA1P78396 465 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 TTC6Q86TZ1 520 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 MTMR10Q9NXD2 777 aa21.09■□□□□ 0.97
PKP3-208ENST00000531857 LTBP2Q14767 1821 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 ZNFX1Q9P2E3 1918 aaKnown RBP21.08■□□□□ 0.97
PKP3-208ENST00000531857 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 GLRX3O76003 335 aaKnown RBP21.08■□□□□ 0.97
PKP3-208ENST00000531857 EVX2Q03828 476 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 MFSD14CQ5VZR4 134 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 CERS3Q8IU89 383 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 NPLOC4Q8TAT6 608 aa21.08■□□□□ 0.97
PKP3-208ENST00000531857 RIOK1Q9BRS2 568 aaKnown RBP21.08■□□□□ 0.97
PKP3-208ENST00000531857 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
PKP3-208ENST00000531857 PARP14Q460N5 1801 aa21.07■□□□□ 0.96
PKP3-208ENST00000531857 ZNF236Q9UL36 1845 aa21.07■□□□□ 0.96
PKP3-208ENST00000531857 SPDYE16A6NNV3 312 aaPredicted RBP21.07■□□□□ 0.96
PKP3-208ENST00000531857 MAP3K12Q12852 859 aa21.07■□□□□ 0.96
PKP3-208ENST00000531857 LBX2Q6XYB7 198 aa21.07■□□□□ 0.96
PKP3-208ENST00000531857 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
PKP3-208ENST00000531857 SENP6Q9GZR1 1112 aaPredicted RBP21.07■□□□□ 0.96
PKP3-208ENST00000531857 RPAP3Q9H6T3 665 aaPredicted RBP21.07■□□□□ 0.96
PKP3-208ENST00000531857 HOXC6P09630 235 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 CNGA1P29973 690 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 CYP2C19P33261 490 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 GRB14Q14449 540 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 SEPT2Q15019 361 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 TRPV1Q8NER1 839 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 CABP5Q9NP86 173 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 DDX20Q9UHI6 824 aaKnown RBP21.06■□□□□ 0.96
PKP3-208ENST00000531857 EXOC6BQ9Y2D4 811 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 STXBP5LQ9Y2K9 1186 aa21.06■□□□□ 0.96
PKP3-208ENST00000531857 BAZ2AQ9UIF9 1905 aaKnown RBP21.06■□□□□ 0.96
PKP3-208ENST00000531857 CEP85Q6P2H3 762 aa21.05■□□□□ 0.96
PKP3-208ENST00000531857 AACSQ86V21 672 aa21.05■□□□□ 0.96
PKP3-208ENST00000531857 IVNS1ABPQ9Y6Y0 642 aa21.05■□□□□ 0.96
PKP3-208ENST00000531857 LAMA2P24043 3122 aaKnown RBP21.04■□□□□ 0.96
PKP3-208ENST00000531857 COL11A1P12107 1806 aaPredicted RBP21.04■□□□□ 0.96
PKP3-208ENST00000531857 A0A1W2PRG0 241 aa21.04■□□□□ 0.96
PKP3-208ENST00000531857 IGHA2P01877 340 aa21.04■□□□□ 0.96
PKP3-208ENST00000531857 POLR3DP05423 398 aaPredicted RBP21.04■□□□□ 0.96
PKP3-208ENST00000531857 GABPAQ06546 454 aa21.04■□□□□ 0.96
PKP3-208ENST00000531857 LPAR1Q92633 364 aa21.04■□□□□ 0.96
PKP3-208ENST00000531857 MAGEB6P1A0A0J9YX57 407 aa21.03■□□□□ 0.96
PKP3-208ENST00000531857 ATN1P54259 1190 aaPredicted RBP21.03■□□□□ 0.96
PKP3-208ENST00000531857 IL1RAPL2Q9NP60 686 aa21.03■□□□□ 0.96
PKP3-208ENST00000531857 CUL9Q8IWT3 2517 aa21.03■□□□□ 0.96
PKP3-208ENST00000531857 KIAA1755Q5JYT7 1200 aa21.02■□□□□ 0.96
PKP3-208ENST00000531857 TMED8Q6PL24 325 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms