RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
NXF1-211ENST00000531709 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 PDE11AQ9HCR9 933 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 RSPH14Q9UHP6 348 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 MROH5Q6ZUA9 1318 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 ENC1O14682 589 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 TADA3O75528 432 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 HNRNPH2P55795 449 aaKnown RBP12.81□□□□□ -0.36
NXF1-211ENST00000531709 SPAG1Q07617 926 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 PTPAQ15257 358 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 SPA17Q15506 151 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 ZHX3Q9H4I2 956 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
NXF1-211ENST00000531709 RTL9Q8NET4 1388 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 IDEP14735 1019 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 PAK1Q13153 545 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 NELFBQ8WX92 580 aa12.81□□□□□ -0.36
NXF1-211ENST00000531709 SRPRBQ9Y5M8 271 aaKnown RBP12.81□□□□□ -0.36
NXF1-211ENST00000531709 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 MCM9Q9NXL9 1143 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 MYO1BO43795 1136 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
NXF1-211ENST00000531709 REXO1L1PQ8IX06 675 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 RABGGTAQ92696 567 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 NWD1Q149M9 1564 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 ATP2B2Q01814 1243 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 ZSCAN26Q16670 478 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 CC2D1AQ6P1N0 951 aaPredicted RBP12.8□□□□□ -0.36
NXF1-211ENST00000531709 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 RMND1Q9NWS8 449 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 ZNF446Q9NWS9 450 aa12.8□□□□□ -0.36
NXF1-211ENST00000531709 GSG1L2A8MUP6 293 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 PLEKHA8P1O95397 391 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 KIF5BP33176 963 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 TCP11L1Q9NUJ3 509 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 TTF2Q9UNY4 1162 aaKnown RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 CPDO75976 1380 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 PSMA7O14818 248 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 CCDC96Q2M329 555 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 CYP26C1Q6V0L0 522 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 TMTC1Q8IUR5 882 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 PAGE5Q96GU1 130 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 PSMB7Q99436 277 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 ERCC5P28715 1186 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 SRGAP1Q7Z6B7 1085 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 RASGRP4Q8TDF6 673 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 TFCP2L1Q9NZI6 479 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 FBXO2Q9UK22 296 aaPredicted RBP12.79□□□□□ -0.36
NXF1-211ENST00000531709 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
NXF1-211ENST00000531709 SETD1AO15047 1707 aaKnown RBP12.78□□□□□ -0.36
NXF1-211ENST00000531709 ASIC1P78348 528 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 RGS22Q8NE09 1264 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 CRNKL1Q9BZJ0 848 aaKnown RBP12.78□□□□□ -0.36
NXF1-211ENST00000531709 RABEP2Q9H5N1 569 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 EPB41L4AQ9HCS5 686 aaPredicted RBP12.78□□□□□ -0.36
NXF1-211ENST00000531709 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 MORC3Q14149 939 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 27.5
NXF1-211ENST00000531709 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 HPSEQ9Y251 543 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 FHOD1Q9Y613 1164 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 SOS2Q07890 1332 aaPredicted RBP12.78□□□□□ -0.36
NXF1-211ENST00000531709 KCNJ18B7U540 433 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 ZMYND10O75800 440 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 H2AFXP16104 143 aaPredicted RBP12.78□□□□□ -0.36
NXF1-211ENST00000531709 ST5P78524 1137 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 CHRNDQ07001 517 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 KCNJ12Q14500 433 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
NXF1-211ENST00000531709 EPS15P42566 896 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 AKR1B10O60218 316 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 CALM1P0DP23 149 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 CALM2P0DP24 149 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 CALM3P0DP25 149 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 PLA2G4AP47712 749 aa12.77□□□□□ -0.36
NXF1-211ENST00000531709 TDRD12Q587J7 1177 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms