RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 EHD4Q9H223 541 aa23.23■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L15C9J2P7 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L13C9JLJ4 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L11C9JVI0 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L18D6R9N7 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L22D6RA61 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L17D6RBQ6 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L19D6RCP7 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L20D6RJB6 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 CCND3P30281 292 aaPredicted RBP23.22■■□□□ 1.31
UBXN1-212ENST00000531625 CCNA1P78396 465 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 USP17L24Q0WX57 530 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 TMED8Q6PL24 325 aaPredicted RBP23.22■■□□□ 1.31
UBXN1-212ENST00000531625 SERPINB13Q9UIV8 391 aa23.22■■□□□ 1.31
UBXN1-212ENST00000531625 LAMA2P24043 3122 aaKnown RBP23.22■■□□□ 1.31
UBXN1-212ENST00000531625 MYH1P12882 1939 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 CNMDO75829 334 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 GLRX3O76003 335 aaKnown RBP23.21■■□□□ 1.31
UBXN1-212ENST00000531625 USP14P54578 494 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 MAP2K5Q13163 448 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 DEFB123Q8N688 67 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 UBE2OQ9C0C9 1292 aaKnown RBP23.21■■□□□ 1.31
UBXN1-212ENST00000531625 KIAA1683Q9H0B3 1180 aa23.21■■□□□ 1.31
UBXN1-212ENST00000531625 IDH1O75874 414 aaKnown RBP23.2■■□□□ 1.3
UBXN1-212ENST00000531625 LBX2Q6XYB7 198 aa23.2■■□□□ 1.3
UBXN1-212ENST00000531625 CATSPERGQ6ZRH7 1159 aa23.2■■□□□ 1.3
UBXN1-212ENST00000531625 EDC3Q96F86 508 aaKnown RBP23.2■■□□□ 1.3
UBXN1-212ENST00000531625 FEZ1Q99689 392 aa23.2■■□□□ 1.3
UBXN1-212ENST00000531625 CWC22Q9HCG8 908 aaKnown RBP23.2■■□□□ 1.3
UBXN1-212ENST00000531625 TLR7Q9NYK1 1049 aaKnown RBP23.2■■□□□ 1.3
UBXN1-212ENST00000531625 USP5P45974 858 aa23.19■■□□□ 1.3
UBXN1-212ENST00000531625 LRRC26Q2I0M4 334 aa23.19■■□□□ 1.3
UBXN1-212ENST00000531625 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
UBXN1-212ENST00000531625 MIGA1Q8NAN2 632 aa23.19■■□□□ 1.3
UBXN1-212ENST00000531625 EAF2Q96CJ1 260 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-212ENST00000531625 CCDC8Q9H0W5 538 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-212ENST00000531625 SLC15A5A6NIM6 579 aa23.18■■□□□ 1.3
UBXN1-212ENST00000531625 HOXC6P09630 235 aa23.18■■□□□ 1.3
UBXN1-212ENST00000531625 CERKLQ49MI3 558 aaPredicted RBP23.18■■□□□ 1.3
UBXN1-212ENST00000531625 MFSD14CQ5VZR4 134 aa23.18■■□□□ 1.3
UBXN1-212ENST00000531625 MAGEB6Q8N7X4 407 aa23.18■■□□□ 1.3
UBXN1-212ENST00000531625 VCAM1P19320 739 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 PTPREP23469 700 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 RAB3GAP1Q15042 981 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 ZYXQ15942 572 aaKnown RBP23.17■■□□□ 1.3
UBXN1-212ENST00000531625 ABCB5Q2M3G0 1257 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 FTSJ3Q8IY81 847 aaKnown RBP23.17■■□□□ 1.3
UBXN1-212ENST00000531625 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 STXBP5LQ9Y2K9 1186 aa23.17■■□□□ 1.3
UBXN1-212ENST00000531625 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 Q7L0L9 218 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 ACER1Q8TDN7 264 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 MTMR10Q9NXD2 777 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 FLRT1Q9NZU1 646 aa23.16■■□□□ 1.3
UBXN1-212ENST00000531625 MSCO60682 206 aa23.15■■□□□ 1.3
UBXN1-212ENST00000531625 GRB14Q14449 540 aa23.15■■□□□ 1.3
UBXN1-212ENST00000531625 SHMT1P34896 483 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 WDR78Q5VTH9 848 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 ANTXR1Q9H6X2 564 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 BTBD7Q9P203 1132 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 NDUFB9Q9Y6M9 179 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 IVNS1ABPQ9Y6Y0 642 aa23.14■■□□□ 1.29
UBXN1-212ENST00000531625 UNC80Q8N2C7 3258 aa23.13■■□□□ 1.29
UBXN1-212ENST00000531625 SPDYE16A6NNV3 312 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-212ENST00000531625 IGHA2P01877 340 aa23.13■■□□□ 1.29
UBXN1-212ENST00000531625 ATP2B2Q01814 1243 aa23.13■■□□□ 1.29
UBXN1-212ENST00000531625 LPAR1Q92633 364 aa23.13■■□□□ 1.29
UBXN1-212ENST00000531625 RIOK1Q9BRS2 568 aaKnown RBP23.13■■□□□ 1.29
UBXN1-212ENST00000531625 RPAP3Q9H6T3 665 aaPredicted RBP23.13■■□□□ 1.29
UBXN1-212ENST00000531625 DDX20Q9UHI6 824 aaKnown RBP23.13■■□□□ 1.29
UBXN1-212ENST00000531625 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
UBXN1-212ENST00000531625 GUCY1A2P33402 732 aa23.12■■□□□ 1.29
UBXN1-212ENST00000531625 PLCD1P51178 756 aa23.12■■□□□ 1.29
UBXN1-212ENST00000531625 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
UBXN1-212ENST00000531625 GABPAQ06546 454 aa23.12■■□□□ 1.29
UBXN1-212ENST00000531625 SENP6Q9GZR1 1112 aaPredicted RBP23.12■■□□□ 1.29
UBXN1-212ENST00000531625 MS4A1P11836 297 aa23.11■■□□□ 1.29
UBXN1-212ENST00000531625 ERC1Q8IUD2 1116 aa23.11■■□□□ 1.29
UBXN1-212ENST00000531625 ITPRIPQ8IWB1 547 aa23.11■■□□□ 1.29
UBXN1-212ENST00000531625 DNM1LO00429 736 aa23.1■■□□□ 1.29
UBXN1-212ENST00000531625 RLBP1P12271 317 aa23.1■■□□□ 1.29
UBXN1-212ENST00000531625 NPLOC4Q8TAT6 608 aa23.1■■□□□ 1.29
UBXN1-212ENST00000531625 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
UBXN1-212ENST00000531625 HOXC10Q9NYD6 342 aa23.1■■□□□ 1.29
UBXN1-212ENST00000531625 STRNO43815 780 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 POLR3DP05423 398 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-212ENST00000531625 CNGA1P29973 690 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 CYP2C19P33261 490 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
UBXN1-212ENST00000531625 COG2Q14746 738 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 SEPT2Q15019 361 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 FAM109BQ6ICB4 259 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-212ENST00000531625 CEP85Q6P2H3 762 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 AACSQ86V21 672 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 TRPV1Q8NER1 839 aa23.09■■□□□ 1.29
UBXN1-212ENST00000531625 LBHD1Q9BQE6 289 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-212ENST00000531625 MAGEB6P1A0A0J9YX57 407 aa23.08■■□□□ 1.29
UBXN1-212ENST00000531625 CYBAP13498 195 aa23.08■■□□□ 1.29
UBXN1-212ENST00000531625 TTF1Q15361 905 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms