RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 USP17L18D6R9N7 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 USP17L22D6RA61 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 USP17L17D6RBQ6 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 USP17L19D6RCP7 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 USP17L20D6RJB6 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 TRIM27P14373 513 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 DYNLL1P63167 89 aaKnown RBP22.02■■□□□ 1.12
SCN4B-205ENST00000531550 CCNA1P78396 465 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 USP17L24Q0WX57 530 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 ZYXQ15942 572 aaKnown RBP22.02■■□□□ 1.12
SCN4B-205ENST00000531550 MFSD14CQ5VZR4 134 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 FAM109BQ6ICB4 259 aaPredicted RBP22.02■■□□□ 1.12
SCN4B-205ENST00000531550 GUCD1Q96NT3 240 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 FEZ1Q99689 392 aa22.02■■□□□ 1.12
SCN4B-205ENST00000531550 MYH1P12882 1939 aa22.02■■□□□ 1.11
SCN4B-205ENST00000531550 POTEB2H3BUK9 544 aa22.01■■□□□ 1.11
SCN4B-205ENST00000531550 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
SCN4B-205ENST00000531550 ZAP70P43403 619 aa22.01■■□□□ 1.11
SCN4B-205ENST00000531550 WDR78Q5VTH9 848 aa22.01■■□□□ 1.11
SCN4B-205ENST00000531550 LBHD1Q9BQE6 289 aaPredicted RBP22.01■■□□□ 1.11
SCN4B-205ENST00000531550 COL25A1Q9BXS0 654 aaPredicted RBP22.01■■□□□ 1.11
SCN4B-205ENST00000531550 PIH1D3Q9NQM4 214 aaKnown RBP22.01■■□□□ 1.11
SCN4B-205ENST00000531550 DDX20Q9UHI6 824 aaKnown RBP22.01■■□□□ 1.11
SCN4B-205ENST00000531550 TNNQ9UQP3 1299 aa22.01■■□□□ 1.11
SCN4B-205ENST00000531550 LAMA2P24043 3122 aaKnown RBP22■■□□□ 1.11
SCN4B-205ENST00000531550 SLC15A5A6NIM6 579 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
SCN4B-205ENST00000531550 IGSF3O75054 1194 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 PTPREP23469 700 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 TATDN1Q6P1N9 297 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 PHF6Q8IWS0 365 aaKnown RBP eCLIP22■■□□□ 1.11
SCN4B-205ENST00000531550 ZNF512BQ96KM6 892 aaPredicted RBP22■■□□□ 1.11
SCN4B-205ENST00000531550 LTBP2Q14767 1821 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 CUL9Q8IWT3 2517 aa22■■□□□ 1.11
SCN4B-205ENST00000531550 MSCO60682 206 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 VCAM1P19320 739 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 CYP7A1P22680 504 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 USP14P54578 494 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 CATSPERGQ6ZRH7 1159 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 LPAR1Q92633 364 aa21.99■■□□□ 1.11
SCN4B-205ENST00000531550 HOXC6P09630 235 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 ATN1P54259 1190 aaPredicted RBP21.98■■□□□ 1.11
SCN4B-205ENST00000531550 POLA2Q14181 598 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 GRB14Q14449 540 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 ZKSCAN2Q63HK3 967 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 LBX2Q6XYB7 198 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 NPLOC4Q8TAT6 608 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 FAM161BQ96MY7 647 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 KIAA1683Q9H0B3 1180 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 BTBD7Q9P203 1132 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 IVNS1ABPQ9Y6Y0 642 aa21.98■■□□□ 1.11
SCN4B-205ENST00000531550 DNM1LO00429 736 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 CNGA1P29973 690 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 USP5P45974 858 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 ATP2B2Q01814 1243 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 OS9Q13438 667 aaPredicted RBP21.97■■□□□ 1.11
SCN4B-205ENST00000531550 RAB3GAP1Q15042 981 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 MIGA1Q8NAN2 632 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 ACER1Q8TDN7 264 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 EHD4Q9H223 541 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 SERPINB13Q9UIV8 391 aa21.97■■□□□ 1.11
SCN4B-205ENST00000531550 SPDYE16A6NNV3 312 aaPredicted RBP21.96■■□□□ 1.11
SCN4B-205ENST00000531550 MS4A1P11836 297 aa21.96■■□□□ 1.11
SCN4B-205ENST00000531550 CYP2C19P33261 490 aa21.96■■□□□ 1.11
SCN4B-205ENST00000531550 RTP1P59025 263 aa21.96■■□□□ 1.11
SCN4B-205ENST00000531550 TRPV1Q8NER1 839 aa21.96■■□□□ 1.11
SCN4B-205ENST00000531550 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
SCN4B-205ENST00000531550 ZNF236Q9UL36 1845 aa21.96■■□□□ 1.11
SCN4B-205ENST00000531550 ABCB5Q2M3G0 1257 aa21.95■■□□□ 1.1
SCN4B-205ENST00000531550 CERKLQ49MI3 558 aaPredicted RBP21.95■■□□□ 1.1
SCN4B-205ENST00000531550 ZNF697Q5TEC3 545 aa21.95■■□□□ 1.1
SCN4B-205ENST00000531550 CERS3Q8IU89 383 aa21.95■■□□□ 1.1
SCN4B-205ENST00000531550 CLUAP1Q96AJ1 413 aa21.95■■□□□ 1.1
SCN4B-205ENST00000531550 RPAP3Q9H6T3 665 aaPredicted RBP21.95■■□□□ 1.1
SCN4B-205ENST00000531550 TLR7Q9NYK1 1049 aaKnown RBP21.95■■□□□ 1.1
SCN4B-205ENST00000531550 PRKAG2Q9UGJ0 569 aa21.95■■□□□ 1.1
SCN4B-205ENST00000531550 DBNLQ9UJU6 430 aaKnown RBP21.95■■□□□ 1.1
SCN4B-205ENST00000531550 RLFQ13129 1914 aa21.94■■□□□ 1.1
SCN4B-205ENST00000531550 IDH1O75874 414 aaKnown RBP21.94■■□□□ 1.1
SCN4B-205ENST00000531550 IGHA2P01877 340 aa21.94■■□□□ 1.1
SCN4B-205ENST00000531550 NEFLP07196 543 aa21.94■■□□□ 1.1
SCN4B-205ENST00000531550 CYBAP13498 195 aa21.94■■□□□ 1.1
SCN4B-205ENST00000531550 SSH3Q8TE77 659 aa21.94■■□□□ 1.1
SCN4B-205ENST00000531550 EYSQ5T1H1 3165 aa21.93■■□□□ 1.1
SCN4B-205ENST00000531550 MAGEB6Q8N7X4 407 aa21.93■■□□□ 1.1
SCN4B-205ENST00000531550 ATP11BQ9Y2G3 1177 aa21.93■■□□□ 1.1
SCN4B-205ENST00000531550 A0A0G2JMZ2 1700 aa21.92■■□□□ 1.1
SCN4B-205ENST00000531550 SURF6O75683 361 aaKnown RBP21.92■■□□□ 1.1
SCN4B-205ENST00000531550 GUCY1A2P33402 732 aa21.92■■□□□ 1.1
SCN4B-205ENST00000531550 SHMT1P34896 483 aa21.92■■□□□ 1.1
SCN4B-205ENST00000531550 GJC2Q5T442 439 aaPredicted RBP21.92■■□□□ 1.1
SCN4B-205ENST00000531550 TTC6Q86TZ1 520 aa21.92■■□□□ 1.1
SCN4B-205ENST00000531550 CABP5Q9NP86 173 aa21.92■■□□□ 1.1
SCN4B-205ENST00000531550 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
SCN4B-205ENST00000531550 OLFML2BQ68BL8 750 aa21.91■■□□□ 1.1
SCN4B-205ENST00000531550 TMEM57Q8N5G2 664 aa21.91■■□□□ 1.1
SCN4B-205ENST00000531550 CCDC8Q9H0W5 538 aaPredicted RBP21.91■■□□□ 1.1
SCN4B-205ENST00000531550 NAV1Q8NEY1 1877 aa21.91■■□□□ 1.1
SCN4B-205ENST00000531550 ADORA2AP29274 412 aa21.9■■□□□ 1.1
SCN4B-205ENST00000531550 PLCD1P51178 756 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms