RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CLMNQ96JQ2 1002 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 ETNK1Q9HBU6 452 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 POLR2AP24928 1970 aaKnown RBP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 KIAA0100Q14667 2235 aaKnown RBP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 H7C1W4 665 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 IGF2BP3O00425 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 CENPCQ03188 943 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 SREBF2Q12772 1141 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 GCKRQ14397 625 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 TXNRD3Q86VQ6 643 aa8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 ANGEL1Q9UNK9 670 aaKnown RBP8.86□□□□□ -0.99
TRIM53CP-201ENST00000531490 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 ITGA6P23229 1130 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 KLRK1P26718 216 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 CASP7P55210 303 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 NEXNQ0ZGT2 675 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 POU4F2Q12837 409 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 BEND3Q5T5X7 828 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 LDLRAD1Q5T700 205 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 CD99L2Q8TCZ2 262 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 UCN2Q96RP3 112 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 CFHR5Q9BXR6 569 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 PCDHAC2Q9Y5I4 1007 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
TRIM53CP-201ENST00000531490 CUL9Q8IWT3 2517 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 XDHP47989 1333 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 SPATA31C2B4DYI2 1134 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 PDE8AO60658 829 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 NF2P35240 595 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 CRHR2Q13324 411 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 CCDC152Q4G0S7 254 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 SLC4A10Q6U841 1118 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 ARMC9Q7Z3E5 817 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 UBE3BQ7Z3V4 1068 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 PODNQ7Z5L7 613 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 KIAA0825Q8IV33 1275 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 LINS1Q8NG48 757 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 TTLL11Q8NHH1 800 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 ZNF609O15014 1411 aa8.84□□□□□ -0.99
TRIM53CP-201ENST00000531490 USP17L5A8MUK1 530 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 H0YGN5 161 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 ATP2B4P23634 1241 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 NCOA4Q13772 614 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 EML3Q32P44 896 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 ANKRD18AQ8IVF6 992 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 OGFOD1Q8N543 542 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
TRIM53CP-201ENST00000531490 NANOS1Q8WY41 292 aaKnown RBP8.83□□□□□ -1
TRIM53CP-201ENST00000531490 PTPN18Q99952 460 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 MINPP1Q9UNW1 487 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 PTPN22Q9Y2R2 807 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 MYH3P11055 1940 aa8.83□□□□□ -1
TRIM53CP-201ENST00000531490 AOX1Q06278 1338 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 LZTS3O60299 673 aaPredicted RBP8.82□□□□□ -1
TRIM53CP-201ENST00000531490 FOXO4P98177 505 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 INTS3Q68E01 1043 aaKnown RBP8.82□□□□□ -1
TRIM53CP-201ENST00000531490 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 DEPDC4Q8N2C3 294 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 GLMNQ92990 594 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 ARMC5Q96C12 935 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 ZBED3Q96IU2 234 aaPredicted RBP8.82□□□□□ -1
TRIM53CP-201ENST00000531490 WNK4Q96J92 1243 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
TRIM53CP-201ENST00000531490 GREM2Q9H772 168 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 EFCC1Q9HA90 598 aa8.82□□□□□ -1
TRIM53CP-201ENST00000531490 CUEDC1Q9NWM3 386 aaPredicted RBP8.82□□□□□ -1
TRIM53CP-201ENST00000531490 MANSC4A6NHS7 340 aaPredicted RBP8.81□□□□□ -1
TRIM53CP-201ENST00000531490 SNAP23O00161 211 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 BCAR3O75815 825 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 INHAP05111 366 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 CSF1RP07333 972 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 NBPF7P0C2Y1 421 aaPredicted RBP8.81□□□□□ -1
TRIM53CP-201ENST00000531490 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
TRIM53CP-201ENST00000531490 GDF10P55107 478 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 ALDH1L2Q3SY69 923 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 EPHA10Q5JZY3 1008 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 STRIP1Q5VSL9 837 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 KAZALD1Q96I82 304 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 SMC4Q9NTJ3 1288 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
TRIM53CP-201ENST00000531490 NOD1Q9Y239 953 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 SSC5DA1L4H1 1573 aa8.81□□□□□ -1
TRIM53CP-201ENST00000531490 LAMA3Q16787 3333 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 CLRN2A0PK11 232 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 F8W031 263 aaPredicted RBP8.8□□□□□ -1
TRIM53CP-201ENST00000531490 CCT4P50991 539 aaKnown RBP8.8□□□□□ -1
TRIM53CP-201ENST00000531490 CTSWP56202 376 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 GTF2IP78347 998 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
TRIM53CP-201ENST00000531490 WDR44Q5JSH3 913 aa8.8□□□□□ -1
TRIM53CP-201ENST00000531490 NBPF12Q5TAG4 269 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms