RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 RUFY2Q8WXA3 655 aa13.88□□□□□ -0.19
ACER3-210ENST00000531352 CCDC17Q96LX7 622 aa13.88□□□□□ -0.19
ACER3-210ENST00000531352 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
ACER3-210ENST00000531352 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
ACER3-210ENST00000531352 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 ZYXQ15942 572 aaKnown RBP13.87□□□□□ -0.19
ACER3-210ENST00000531352 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 AS3MTQ9HBK9 375 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 EMILIN3Q9NT22 766 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 LAMA4Q16363 1823 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 FGRP09769 529 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 CRHR2Q13324 411 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 SH3D19Q5HYK7 790 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 SAGE1Q9NXZ1 904 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 LOC285556D6RIA3 1793 aa13.87□□□□□ -0.19
ACER3-210ENST00000531352 PDHXO00330 501 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 CDC45O75419 566 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 PDE4BQ07343 736 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 ZNF444Q8N0Y2 327 aaPredicted RBP13.86□□□□□ -0.19
ACER3-210ENST00000531352 TBC1D2Q9BYX2 928 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 MYH4Q9Y623 1939 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 ZNF213O14771 459 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 CA12O43570 354 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
ACER3-210ENST00000531352 TFAP4Q01664 338 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
ACER3-210ENST00000531352 ANKRD23Q86SG2 305 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
ACER3-210ENST00000531352 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
ACER3-210ENST00000531352 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 NMT2O60551 498 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 ALDH1A1P00352 501 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 SLC3A2P08195 630 aaKnown RBP13.85□□□□□ -0.19
ACER3-210ENST00000531352 CYP2C8P10632 490 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 EEF2P13639 858 aaKnown RBP13.85□□□□□ -0.19
ACER3-210ENST00000531352 ICA1Q05084 483 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 TAF1CQ15572 869 aaPredicted RBP13.85□□□□□ -0.19
ACER3-210ENST00000531352 OTUD7BQ6GQQ9 843 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 CFHR5Q9BXR6 569 aa13.85□□□□□ -0.19
ACER3-210ENST00000531352 ORC4O43929 436 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 RRP12Q5JTH9 1297 aaKnown RBP13.84□□□□□ -0.19
ACER3-210ENST00000531352 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
ACER3-210ENST00000531352 CEP95Q96GE4 821 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 FEZ1Q99689 392 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 KANSL2Q9H9L4 492 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 NEDD4P46934 1319 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 C19orf81C9J6K1 198 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 RANBP6O60518 1105 aaKnown RBP13.84□□□□□ -0.19
ACER3-210ENST00000531352 CYP21A2P08686 494 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 NEDD1Q8NHV4 660 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
ACER3-210ENST00000531352 CAP1Q01518 475 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 MTMR4Q9NYA4 1195 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 TMX2Q9Y320 296 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
ACER3-210ENST00000531352 GPR25O00155 361 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 IMMTQ16891 758 aaKnown RBP13.83□□□□□ -0.2
ACER3-210ENST00000531352 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 STOX1Q6ZVD7 989 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 ZNF296Q8WUU4 475 aaPredicted RBP13.83□□□□□ -0.2
ACER3-210ENST00000531352 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 ZCCHC17Q9NP64 241 aaKnown RBP13.83□□□□□ -0.2
ACER3-210ENST00000531352 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
ACER3-210ENST00000531352 DOCK3Q8IZD9 2030 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 TLR2O60603 784 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 PEX10O60683 326 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 SEC24BO95487 1268 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 VCAM1P19320 739 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 CLIP2Q9UDT6 1046 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 ADGRA2Q96PE1 1338 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 PLIN4Q96Q06 1357 aa13.82□□□□□ -0.2
ACER3-210ENST00000531352 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
ACER3-210ENST00000531352 KIAA1211Q6ZU35 1233 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 ASCC2Q9H1I8 757 aaPredicted RBP13.81□□□□□ -0.2
ACER3-210ENST00000531352 ARHGEF10LQ9HCE6 1279 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 NYAP2Q9P242 653 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 CPA4Q9UI42 421 aa13.81□□□□□ -0.2
ACER3-210ENST00000531352 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
ACER3-210ENST00000531352 RLFQ13129 1914 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms