RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ACER1Q8TDN7 264 aa19.1■□□□□ 0.65
CPSF1-205ENST00000531042 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
CPSF1-205ENST00000531042 CRISPLD2Q9H0B8 497 aa19.1■□□□□ 0.65
CPSF1-205ENST00000531042 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.1■□□□□ 0.654e-7■■■□□ 15.3
CPSF1-205ENST00000531042 DCP1AQ9NPI6 582 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-205ENST00000531042 COLQQ9Y215 455 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-205ENST00000531042 CEP290O15078 2479 aa19.1■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 GUCY1A2P33402 732 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 ADD2P35612 726 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 EVX2Q03828 476 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 HAUS7Q99871 368 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 PAGR1Q9BTK6 254 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
CPSF1-205ENST00000531042 CYP2B6P20813 491 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 MAPK4P31152 587 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 TRIM32Q13049 653 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 SLFNL1Q499Z3 407 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 CATSPERGQ6ZRH7 1159 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 SOCS4Q8WXH5 440 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 TRIB2Q92519 343 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 LRRCC1Q9C099 1032 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 PORCNQ9H237 461 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 ARMT1Q9H993 441 aa19.08■□□□□ 0.64
CPSF1-205ENST00000531042 RPTORQ8N122 1335 aa19.07■□□□□ 0.64
CPSF1-205ENST00000531042 XRCC5P13010 732 aaKnown RBP19.07■□□□□ 0.64
CPSF1-205ENST00000531042 VCAM1P19320 739 aa19.07■□□□□ 0.64
CPSF1-205ENST00000531042 SEPT2Q15019 361 aa19.07■□□□□ 0.64
CPSF1-205ENST00000531042 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.07■□□□□ 0.643e-10■■■■■ 32.7
CPSF1-205ENST00000531042 RABGAP1Q9Y3P9 1069 aa19.07■□□□□ 0.64
CPSF1-205ENST00000531042 MYH7P12883 1935 aa19.07■□□□□ 0.64
CPSF1-205ENST00000531042 PRKAB2O43741 272 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 CNMDO75829 334 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 CYP2D6P10635 497 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 GPR142Q7Z601 462 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 PLEKHH3Q7Z736 793 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 CCAR1Q8IX12 1150 aaKnown RBP19.06■□□□□ 0.64
CPSF1-205ENST00000531042 USP6NLQ92738 828 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 HMX1Q9NP08 348 aaPredicted RBP19.06■□□□□ 0.64
CPSF1-205ENST00000531042 ATP8A2Q9NTI2 1148 aa19.06■□□□□ 0.64
CPSF1-205ENST00000531042 MPHOSPH10O00566 681 aaKnown RBP19.05■□□□□ 0.64
CPSF1-205ENST00000531042 SMARCA5O60264 1052 aaPredicted RBP19.05■□□□□ 0.64
CPSF1-205ENST00000531042 MBD4O95243 580 aa19.05■□□□□ 0.64
CPSF1-205ENST00000531042 UBE3CQ15386 1083 aa19.05■□□□□ 0.64
CPSF1-205ENST00000531042 MORN1Q5T089 497 aa19.05■□□□□ 0.64
CPSF1-205ENST00000531042 SWAP70Q9UH65 585 aa19.05■□□□□ 0.64
CPSF1-205ENST00000531042 MYH8P13535 1937 aa19.05■□□□□ 0.64
CPSF1-205ENST00000531042 BAZ2AQ9UIF9 1905 aaKnown RBP19.05■□□□□ 0.64
CPSF1-205ENST00000531042 A0A1W2PRG0 241 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 CHGBP05060 677 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 MAP3K21Q5TCX8 1036 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 LBX2Q6XYB7 198 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 TRMT44Q8IYL2 757 aaKnown RBP19.04■□□□□ 0.64
CPSF1-205ENST00000531042 SLC44A5Q8NCS7 719 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 DYNLL2Q96FJ2 89 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 PAWRQ96IZ0 340 aaKnown RBP19.04■□□□□ 0.64
CPSF1-205ENST00000531042 RPAP3Q9H6T3 665 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-205ENST00000531042 NR2E3Q9Y5X4 410 aa19.04■□□□□ 0.64
CPSF1-205ENST00000531042 RGS2P41220 211 aa19.03■□□□□ 0.64
CPSF1-205ENST00000531042 FXR1P51114 621 aaKnown RBP eCLIP19.03■□□□□ 0.64
CPSF1-205ENST00000531042 CCNA1P78396 465 aa19.03■□□□□ 0.64
CPSF1-205ENST00000531042 CHRDL2Q6WN34 429 aa19.03■□□□□ 0.64
CPSF1-205ENST00000531042 TMEM179Q6ZVK1 233 aa19.03■□□□□ 0.64
CPSF1-205ENST00000531042 ANKLE1Q8NAG6 615 aa19.03■□□□□ 0.64
CPSF1-205ENST00000531042 SPDYE16A6NNV3 312 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-205ENST00000531042 PRKAR2AP13861 404 aaKnown RBP19.02■□□□□ 0.64
CPSF1-205ENST00000531042 ZKSCAN1P17029 563 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-205ENST00000531042 C12orf60Q5U649 245 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 ZSCAN25Q6NSZ9 544 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 NECAB2Q7Z6G3 386 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 DIS3LQ8TF46 1054 aaKnown RBP19.02■□□□□ 0.64
CPSF1-205ENST00000531042 DCTPP1Q9H773 170 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 CWC22Q9HCG8 908 aaKnown RBP19.02■□□□□ 0.64
CPSF1-205ENST00000531042 ECHDC1Q9NTX5 307 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 BTBD7Q9P203 1132 aa19.02■□□□□ 0.64
CPSF1-205ENST00000531042 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
CPSF1-205ENST00000531042 EVI5O60447 810 aa19.01■□□□□ 0.63
CPSF1-205ENST00000531042 GLRX3O76003 335 aaKnown RBP19.01■□□□□ 0.63
CPSF1-205ENST00000531042 CACNB2Q08289 660 aaPredicted RBP19.01■□□□□ 0.63
CPSF1-205ENST00000531042 CCL14Q16627 93 aa19.01■□□□□ 0.63
CPSF1-205ENST00000531042 APBA2Q99767 749 aa19.01■□□□□ 0.63
CPSF1-205ENST00000531042 PUS7LQ9H0K6 701 aaKnown RBP19.01■□□□□ 0.63
CPSF1-205ENST00000531042 ALPK3Q96L96 1907 aa19.01■□□□□ 0.63
CPSF1-205ENST00000531042 USP17L12C9JPN9 530 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 USP17L21D6R901 530 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 SMIM22K7EJ46 135 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 AKR1B1P15121 316 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 CDK8P49336 464 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 MNX1P50219 401 aaPredicted RBP19■□□□□ 0.63
CPSF1-205ENST00000531042 MAP2K5Q13163 448 aa19■□□□□ 0.63
CPSF1-205ENST00000531042 COG2Q14746 738 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms