RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 USP6NLQ92738 828 aa22.1■■□□□ 1.13
PSMC3-208ENST00000530887 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
PSMC3-208ENST00000530887 CRNKL1Q9BZJ0 848 aaKnown RBP22.1■■□□□ 1.13
PSMC3-208ENST00000530887 IVNS1ABPQ9Y6Y0 642 aa22.1■■□□□ 1.13
PSMC3-208ENST00000530887 MYO5AQ9Y4I1 1855 aaKnown RBP22.09■■□□□ 1.13
PSMC3-208ENST00000530887 MORN1Q5T089 497 aa22.09■■□□□ 1.13
PSMC3-208ENST00000530887 CATSPERGQ6ZRH7 1159 aa22.09■■□□□ 1.13
PSMC3-208ENST00000530887 RPAP2Q8IXW5 612 aaPredicted RBP22.09■■□□□ 1.13
PSMC3-208ENST00000530887 TLR7Q9NYK1 1049 aaKnown RBP22.09■■□□□ 1.13
PSMC3-208ENST00000530887 RANBP2P49792 3224 aaKnown RBP22.08■■□□□ 1.13
PSMC3-208ENST00000530887 PLXNB2O15031 1838 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 MAGEB6P1A0A0J9YX57 407 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 SLC15A5A6NIM6 579 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 POLR3DP05423 398 aaPredicted RBP22.08■■□□□ 1.13
PSMC3-208ENST00000530887 JAG1P78504 1218 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 MAP2K5Q13163 448 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 RAB3GAP1Q15042 981 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 MFSD14CQ5VZR4 134 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 KIF1BPQ96EK5 621 aa22.08■■□□□ 1.13
PSMC3-208ENST00000530887 RLBP1P12271 317 aa22.07■■□□□ 1.12
PSMC3-208ENST00000530887 DIS3LQ8TF46 1054 aaKnown RBP22.07■■□□□ 1.12
PSMC3-208ENST00000530887 EDC3Q96F86 508 aaKnown RBP22.07■■□□□ 1.12
PSMC3-208ENST00000530887 GDF15Q99988 308 aa22.07■■□□□ 1.12
PSMC3-208ENST00000530887 SWAP70Q9UH65 585 aa22.07■■□□□ 1.12
PSMC3-208ENST00000530887 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 VCAM1P19320 739 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 Q3C1V9 767 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 C7orf61Q8IZ16 206 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 RHPN1Q8TCX5 695 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 RIOK1Q9BRS2 568 aaKnown RBP22.06■■□□□ 1.12
PSMC3-208ENST00000530887 PORCNQ9H237 461 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 HOXC10Q9NYD6 342 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 EXOC6BQ9Y2D4 811 aa22.06■■□□□ 1.12
PSMC3-208ENST00000530887 RAB11FIP3O75154 756 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 HOXC6P09630 235 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 IFIT2P09913 472 aaKnown RBP22.05■■□□□ 1.12
PSMC3-208ENST00000530887 CACNB2Q08289 660 aaPredicted RBP22.05■■□□□ 1.12
PSMC3-208ENST00000530887 TRIM32Q13049 653 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 SLC9C2Q5TAH2 1124 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 AMOTL1Q8IY63 956 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 MB21D1Q8N884 522 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 SH2D4AQ9H788 454 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 SLC5A4Q9NY91 659 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 STAP2Q9UGK3 403 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 DDX19BQ9UMR2 479 aa22.05■■□□□ 1.12
PSMC3-208ENST00000530887 DDX60LQ5H9U9 1706 aaKnown RBP22.04■■□□□ 1.12
PSMC3-208ENST00000530887 STRNO43815 780 aa22.04■■□□□ 1.12
PSMC3-208ENST00000530887 GABPAQ06546 454 aa22.04■■□□□ 1.12
PSMC3-208ENST00000530887 ANTXR1Q9H6X2 564 aa22.04■■□□□ 1.12
PSMC3-208ENST00000530887 PDE6AP16499 860 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 PTPREP23469 700 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 SHMT1P34896 483 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 MNX1P50219 401 aaPredicted RBP22.03■■□□□ 1.12
PSMC3-208ENST00000530887 ZYXQ15942 572 aaKnown RBP22.03■■□□□ 1.12
PSMC3-208ENST00000530887 TMEM179Q6ZVK1 233 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 LPAR1Q92633 364 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 DDRGK1Q96HY6 314 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.03■■□□□ 1.121e-12■■□□□ 13.5
PSMC3-208ENST00000530887 MCM9Q9NXL9 1143 aa22.03■■□□□ 1.12
PSMC3-208ENST00000530887 ALPK3Q96L96 1907 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 COL6A1P12109 1028 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 ATP2B2Q01814 1243 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 GRB14Q14449 540 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 COG2Q14746 738 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 LRIT3Q3SXY7 679 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 WDR78Q5VTH9 848 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 SHCBP1Q8NEM2 672 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 RPAP3Q9H6T3 665 aaPredicted RBP22.02■■□□□ 1.12
PSMC3-208ENST00000530887 ATP8A2Q9NTI2 1148 aa22.02■■□□□ 1.12
PSMC3-208ENST00000530887 PLCD1P51178 756 aa22.01■■□□□ 1.11
PSMC3-208ENST00000530887 SHROOM1Q2M3G4 852 aaPredicted RBP22.01■■□□□ 1.11
PSMC3-208ENST00000530887 LHX8Q68G74 356 aa22.01■■□□□ 1.11
PSMC3-208ENST00000530887 CCDC17Q96LX7 622 aa22.01■■□□□ 1.11
PSMC3-208ENST00000530887 ARHGEF10LQ9HCE6 1279 aa22.01■■□□□ 1.11
PSMC3-208ENST00000530887 NAV1Q8NEY1 1877 aa22■■□□□ 1.11
PSMC3-208ENST00000530887 SPDYE16A6NNV3 312 aaPredicted RBP22■■□□□ 1.11
PSMC3-208ENST00000530887 CNMDO75829 334 aa22■■□□□ 1.11
PSMC3-208ENST00000530887 TDHQ8IZJ6 230 aa22■■□□□ 1.11
PSMC3-208ENST00000530887 IL1RAPL2Q9NP60 686 aa22■■□□□ 1.11
PSMC3-208ENST00000530887 MPHOSPH10O00566 681 aaKnown RBP21.99■■□□□ 1.11
PSMC3-208ENST00000530887 ACER1Q8TDN7 264 aa21.99■■□□□ 1.11
PSMC3-208ENST00000530887 DCP1AQ9NPI6 582 aaPredicted RBP21.99■■□□□ 1.11
PSMC3-208ENST00000530887 DDX20Q9UHI6 824 aaKnown RBP21.99■■□□□ 1.11
PSMC3-208ENST00000530887 ZMYND8Q9ULU4 1186 aaPredicted RBP21.99■■□□□ 1.11
PSMC3-208ENST00000530887 SZT2Q5T011 3432 aa21.99■■□□□ 1.11
PSMC3-208ENST00000530887 PFASO15067 1338 aa21.99■■□□□ 1.11
PSMC3-208ENST00000530887 ZNF532Q9HCE3 1301 aa21.99■■□□□ 1.11
PSMC3-208ENST00000530887 CCND3P30281 292 aaPredicted RBP21.98■■□□□ 1.11
PSMC3-208ENST00000530887 SEPT2Q15019 361 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 CCL14Q16627 93 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 OLFML2BQ68BL8 750 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 ZSCAN25Q6NSZ9 544 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 DPP9Q86TI2 863 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 ABRAQ8N0Z2 381 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 DNAJC2Q99543 621 aaKnown RBP21.98■■□□□ 1.11
PSMC3-208ENST00000530887 MROH8Q9H579 483 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 NDUFB9Q9Y6M9 179 aa21.98■■□□□ 1.11
PSMC3-208ENST00000530887 GOLIM4O00461 696 aa21.97■■□□□ 1.11
PSMC3-208ENST00000530887 MAGEA10P43363 369 aaPredicted RBP21.97■■□□□ 1.11
PSMC3-208ENST00000530887 ARRDC4Q8NCT1 418 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms