RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 BRCA2P51587 3418 aa18.56■□□□□ 0.56
CTSB-219ENST00000530640 CTGFP29279 349 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 FXR1P51114 621 aaKnown RBP eCLIP18.55■□□□□ 0.56
CTSB-219ENST00000530640 TRIM34Q9BYJ4 488 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 GNAT2P19087 354 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 USP5P45974 858 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 MTFR1Q15390 333 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 CRACR2BQ8N4Y2 399 aaPredicted RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 EPB41L4AQ9HCS5 686 aaPredicted RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 BIN2Q9UBW5 565 aaPredicted RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 SAP30BPQ9UHR5 308 aaKnown RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 PNMA3Q9UL41 463 aa18.55■□□□□ 0.56
CTSB-219ENST00000530640 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
CTSB-219ENST00000530640 MYH1P12882 1939 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 MYCP01106 439 aaPredicted RBP18.54■□□□□ 0.56
CTSB-219ENST00000530640 HSPA4P34932 840 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 CAP2P40123 477 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 IRF5Q13568 498 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 GADL1Q6ZQY3 521 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 PALD1Q9ULE6 856 aa18.54■□□□□ 0.56
CTSB-219ENST00000530640 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
CTSB-219ENST00000530640 ZSWIM8A7E2V4 1837 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 GSG1L2A8MUP6 293 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 H0YGN5 161 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 CYP2C8P10632 490 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 CCL5P13501 91 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 PRKCZQ05513 592 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
CTSB-219ENST00000530640 DPF3Q92784 378 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 IL17RAQ96F46 866 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 NR2E3Q9Y5X4 410 aa18.53■□□□□ 0.56
CTSB-219ENST00000530640 PRKAB2O43741 272 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 PABPC4Q13310 644 aaKnown RBP eCLIP18.52■□□□□ 0.554e-12■■■■■ 77.3
CTSB-219ENST00000530640 NECTIN1Q15223 517 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 ALX1Q15699 326 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.55
CTSB-219ENST00000530640 PROCA1Q8NCQ7 364 aaPredicted RBP18.52■□□□□ 0.55
CTSB-219ENST00000530640 KCNB2Q92953 911 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 SHISA4Q96DD7 197 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 DNAJC18Q9H819 358 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 AGTPBP1Q9UPW5 1226 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 SLC4A4Q9Y6R1 1079 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.55
CTSB-219ENST00000530640 LOC285556D6RIA3 1793 aa18.52■□□□□ 0.55
CTSB-219ENST00000530640 PATL2C9JE40 543 aaKnown RBP18.51■□□□□ 0.55
CTSB-219ENST00000530640 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
CTSB-219ENST00000530640 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
CTSB-219ENST00000530640 UBE2Q1Q7Z7E8 422 aa18.51■□□□□ 0.55
CTSB-219ENST00000530640 COA7Q96BR5 231 aa18.51■□□□□ 0.55
CTSB-219ENST00000530640 CRNKL1Q9BZJ0 848 aaKnown RBP18.51■□□□□ 0.55
CTSB-219ENST00000530640 BAZ2AQ9UIF9 1905 aaKnown RBP18.5■□□□□ 0.55
CTSB-219ENST00000530640 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 TNPO2O14787 897 aaKnown RBP18.5■□□□□ 0.55
CTSB-219ENST00000530640 ADCY3O60266 1144 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 SGPL1O95470 568 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 GCLCP48506 637 aaPredicted RBP18.5■□□□□ 0.55
CTSB-219ENST00000530640 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
CTSB-219ENST00000530640 ZNF280CQ8ND82 737 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
CTSB-219ENST00000530640 SDR42E1Q8WUS8 393 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
CTSB-219ENST00000530640 GDF11O95390 407 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 FGAP02671 866 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 ASNSP08243 561 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 MCCP23508 829 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 FLT3LGP49771 235 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 SPP2Q13103 211 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 FAM110CQ1W6H9 321 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 CREB3L3Q68CJ9 461 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 KIF2CQ99661 725 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 DCP1AQ9NPI6 582 aaPredicted RBP18.49■□□□□ 0.55
CTSB-219ENST00000530640 ATP8A2Q9NTI2 1148 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 CEP290O15078 2479 aa18.49■□□□□ 0.55
CTSB-219ENST00000530640 SLC27A2O14975 620 aa18.48■□□□□ 0.55
CTSB-219ENST00000530640 ECM2O94769 699 aaPredicted RBP18.48■□□□□ 0.55
CTSB-219ENST00000530640 ANAPC15P60006 121 aa18.48■□□□□ 0.55
CTSB-219ENST00000530640 TTC6Q86TZ1 520 aa18.48■□□□□ 0.55
CTSB-219ENST00000530640 HMGCS2P54868 508 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 NACAP1Q9BZK3 213 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 NAPBQ9H115 298 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 EHD4Q9H223 541 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 CTNNA3Q9UI47 895 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 SERPINB13Q9UIV8 391 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 ZBTB21Q9ULJ3 1066 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 GABRQQ9UN88 632 aa18.47■□□□□ 0.55
CTSB-219ENST00000530640 MGAMO43451 1857 aa18.46■□□□□ 0.55
CTSB-219ENST00000530640 A0A1W2PPC1 479 aa18.46■□□□□ 0.55
CTSB-219ENST00000530640 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
CTSB-219ENST00000530640 CYP21A2P08686 494 aa18.46■□□□□ 0.55
CTSB-219ENST00000530640 TSGA10IPQ3SY00 556 aa18.46■□□□□ 0.55
CTSB-219ENST00000530640 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms