RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 USP17L15C9J2P7 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L13C9JLJ4 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L11C9JVI0 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L18D6R9N7 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L22D6RA61 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L17D6RBQ6 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L19D6RCP7 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L20D6RJB6 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 ERVK-9P63128 1117 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 ERVK-24P63145 666 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 USP17L24Q0WX57 530 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 SDR42E1Q8WUS8 393 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 HAUS7Q99871 368 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.25■■□□□ 1.63
SMPD1-204ENST00000530395 RBPJLQ9UBG7 517 aa25.25■■□□□ 1.63
SMPD1-204ENST00000530395 BAZ2AQ9UIF9 1905 aaKnown RBP25.24■■□□□ 1.63
SMPD1-204ENST00000530395 H0YGN5 161 aa25.24■■□□□ 1.63
SMPD1-204ENST00000530395 ADD2P35612 726 aa25.24■■□□□ 1.63
SMPD1-204ENST00000530395 GABPAQ06546 454 aa25.24■■□□□ 1.63
SMPD1-204ENST00000530395 NUDT12Q9BQG2 462 aa25.24■■□□□ 1.63
SMPD1-204ENST00000530395 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
SMPD1-204ENST00000530395 CWC22Q9HCG8 908 aaKnown RBP25.24■■□□□ 1.63
SMPD1-204ENST00000530395 DCP1AQ9NPI6 582 aaPredicted RBP25.24■■□□□ 1.63
SMPD1-204ENST00000530395 MPHOSPH10O00566 681 aaKnown RBP25.23■■□□□ 1.63
SMPD1-204ENST00000530395 PEX10O60683 326 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 MBD4O95243 580 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 VCAM1P19320 739 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 CYP2B6P20813 491 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 ACER1Q8TDN7 264 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 CRISPLD2Q9H0B8 497 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 HMX1Q9NP08 348 aaPredicted RBP25.22■■□□□ 1.63
SMPD1-204ENST00000530395 PCDH10Q9P2E7 1040 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 SWAP70Q9UH65 585 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 RABGAP1Q9Y3P9 1069 aa25.22■■□□□ 1.63
SMPD1-204ENST00000530395 RPTORQ8N122 1335 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 XRCC5P13010 732 aaKnown RBP25.21■■□□□ 1.63
SMPD1-204ENST00000530395 CCNA1P78396 465 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 SEPT2Q15019 361 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 ZSCAN25Q6NSZ9 544 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 CATSPERGQ6ZRH7 1159 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 AMOTL1Q8IY63 956 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 TRMT44Q8IYL2 757 aaKnown RBP25.21■■□□□ 1.63
SMPD1-204ENST00000530395 ATP8A2Q9NTI2 1148 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 NR2E3Q9Y5X4 410 aa25.21■■□□□ 1.63
SMPD1-204ENST00000530395 UBE3CQ15386 1083 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 Q3C1V9 767 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 GPR142Q7Z601 462 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 PLEKHH3Q7Z736 793 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 TRIB2Q92519 343 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 DDRGK1Q96HY6 314 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 PORCNQ9H237 461 aa25.2■■□□□ 1.62
SMPD1-204ENST00000530395 COLQQ9Y215 455 aaPredicted RBP25.2■■□□□ 1.62
SMPD1-204ENST00000530395 GLRX3O76003 335 aaKnown RBP25.19■■□□□ 1.62
SMPD1-204ENST00000530395 GUCY1A2P33402 732 aa25.19■■□□□ 1.62
SMPD1-204ENST00000530395 RGS2P41220 211 aa25.19■■□□□ 1.62
SMPD1-204ENST00000530395 TMEM179Q6ZVK1 233 aa25.19■■□□□ 1.62
SMPD1-204ENST00000530395 RPAP3Q9H6T3 665 aaPredicted RBP25.19■■□□□ 1.62
SMPD1-204ENST00000530395 SMARCA5O60264 1052 aaPredicted RBP25.18■■□□□ 1.62
SMPD1-204ENST00000530395 CYP2D6P10635 497 aa25.18■■□□□ 1.62
SMPD1-204ENST00000530395 ZKSCAN1P17029 563 aaPredicted RBP25.18■■□□□ 1.62
SMPD1-204ENST00000530395 EVX2Q03828 476 aa25.18■■□□□ 1.62
SMPD1-204ENST00000530395 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
SMPD1-204ENST00000530395 ANKLE1Q8NAG6 615 aa25.18■■□□□ 1.62
SMPD1-204ENST00000530395 TRIOBPQ9H2D6 2365 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 PRKAB2O43741 272 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 TRIM32Q13049 653 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 SLFNL1Q499Z3 407 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 GPATCH3Q96I76 525 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
SMPD1-204ENST00000530395 CNMDO75829 334 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 PRKAR2AP13861 404 aaKnown RBP25.16■■□□□ 1.62
SMPD1-204ENST00000530395 MORN1Q5T089 497 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 POTEEQ6S8J3 1075 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 NECAB2Q7Z6G3 386 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 SLC44A5Q8NCS7 719 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 APBA2Q99767 749 aa25.16■■□□□ 1.62
SMPD1-204ENST00000530395 RANBP2P49792 3224 aaKnown RBP25.15■■□□□ 1.62
SMPD1-204ENST00000530395 MAP3K21Q5TCX8 1036 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 WDR78Q5VTH9 848 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 CHRDL2Q6WN34 429 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 USP6NLQ92738 828 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 DYNLL2Q96FJ2 89 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 PAWRQ96IZ0 340 aaKnown RBP25.15■■□□□ 1.62
SMPD1-204ENST00000530395 SH2D4AQ9H788 454 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 SLC4A4Q9Y6R1 1079 aa25.15■■□□□ 1.62
SMPD1-204ENST00000530395 SPDYE16A6NNV3 312 aaPredicted RBP25.14■■□□□ 1.62
SMPD1-204ENST00000530395 EVI5O60447 810 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 CCDC17Q96LX7 622 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 TANGO6Q9C0B7 1094 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 DCTPP1Q9H773 170 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 ARHGEF10LQ9HCE6 1279 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 IVNS1ABPQ9Y6Y0 642 aa25.14■■□□□ 1.62
SMPD1-204ENST00000530395 ALPK3Q96L96 1907 aa25.14■■□□□ 1.61
SMPD1-204ENST00000530395 A0A1W2PRG0 241 aa25.13■■□□□ 1.61
SMPD1-204ENST00000530395 MAP2K5Q13163 448 aa25.13■■□□□ 1.61
SMPD1-204ENST00000530395 C12orf60Q5U649 245 aa25.13■■□□□ 1.61
SMPD1-204ENST00000530395 A0A0G2JMZ2 1700 aa25.12■■□□□ 1.61
SMPD1-204ENST00000530395 USP17L12C9JPN9 530 aa25.12■■□□□ 1.61
SMPD1-204ENST00000530395 USP17L21D6R901 530 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms