RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GRIA4P48058 902 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 MAP3K10Q02779 954 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
SVIP-204ENST00000530199 TMEM102Q8N9M5 508 aaPredicted RBP9.63□□□□□ -0.87
SVIP-204ENST00000530199 HHIPQ96QV1 700 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 RSRP1Q9BUV0 290 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 TANGO6Q9C0B7 1094 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 BHLHE41Q9C0J9 482 aaPredicted RBP9.63□□□□□ -0.87
SVIP-204ENST00000530199 ZFYVE1Q9HBF4 777 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 KBTBD4Q9NVX7 518 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 THSD7BQ9C0I4 1608 aa9.63□□□□□ -0.87
SVIP-204ENST00000530199 J3QW42 95 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 ITPKAP23677 461 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 ZNF468Q5VIY5 522 aaPredicted RBP9.62□□□□□ -0.87
SVIP-204ENST00000530199 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 SYT9Q86SS6 491 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
SVIP-204ENST00000530199 NXPE3Q969Y0 559 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 GMLQ99445 158 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 IGFLR1Q9H665 355 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
SVIP-204ENST00000530199 WDR33Q9C0J8 1336 aaKnown RBP9.61□□□□□ -0.87
SVIP-204ENST00000530199 METTL12A8MUP2 240 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 C2CD2LO14523 706 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 PCSK7Q16549 785 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 SPRED3Q2MJR0 410 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 DEFB115Q30KQ5 88 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 HFE2Q6ZVN8 426 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 SV2BQ7L1I2 683 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 PBX4Q9BYU1 374 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 DNAJB12Q9NXW2 375 aaKnown RBP9.61□□□□□ -0.87
SVIP-204ENST00000530199 C4AP0C0L4 1744 aa9.61□□□□□ -0.87
SVIP-204ENST00000530199 TTC21BQ7Z4L5 1316 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 PDE2AO00408 941 aaPredicted RBP9.6□□□□□ -0.87
SVIP-204ENST00000530199 SIN3BO75182 1162 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 FBXO24O75426 580 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 ATP11AP98196 1134 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 PWP1Q13610 501 aa9.6□□□□□ -0.87
SVIP-204ENST00000530199 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
SVIP-204ENST00000530199 TRIM56Q9BRZ2 755 aaKnown RBP9.6□□□□□ -0.87
SVIP-204ENST00000530199 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
SVIP-204ENST00000530199 TIAM2Q8IVF5 1701 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 A0A096LPE4 126 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 A0A1W2PPZ6 126 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 BMP4P12644 408 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 DNAJA1P31689 397 aaKnown RBP9.59□□□□□ -0.87
SVIP-204ENST00000530199 GJA8P48165 433 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 RASSF7Q02833 373 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 ARID5AQ03989 594 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 HABP4Q5JVS0 413 aaKnown RBP9.59□□□□□ -0.87
SVIP-204ENST00000530199 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 RELL1Q8IUW5 271 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
SVIP-204ENST00000530199 CEP44Q9C0F1 390 aa9.59□□□□□ -0.87
SVIP-204ENST00000530199 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
SVIP-204ENST00000530199 DLL1O00548 723 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 GHRHP01286 108 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 RLBP1P12271 317 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 TMF1P82094 1093 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 TBC1D8BQ0IIM8 1120 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 PAK2Q13177 524 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 LDHDQ86WU2 507 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 ASAP3Q8TDY4 903 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 TMEM74Q96NL1 305 aa9.58□□□□□ -0.88
SVIP-204ENST00000530199 CA12O43570 354 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 ATP2B1P20020 1258 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 PCBP4P57723 403 aaKnown RBP9.57□□□□□ -0.88
SVIP-204ENST00000530199 RPS26P11Q5JNZ5 115 aaPredicted RBP9.57□□□□□ -0.88
SVIP-204ENST00000530199 VPS37DQ86XT2 251 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 TNFRSF25Q93038 417 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 POP1Q99575 1024 aaKnown RBP9.57□□□□□ -0.88
SVIP-204ENST00000530199 RBSNQ9H1K0 784 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 ZNF576Q9H609 170 aa9.57□□□□□ -0.88
SVIP-204ENST00000530199 AVENQ9NQS1 362 aaPredicted RBP9.57□□□□□ -0.88
SVIP-204ENST00000530199 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
SVIP-204ENST00000530199 F6X3S4 739 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 EIF2AK2P19525 551 aaKnown RBP9.56□□□□□ -0.88
SVIP-204ENST00000530199 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
SVIP-204ENST00000530199 LINC00116Q8NCU8 138 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 GPRASP2Q96D09 838 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 NECAB3Q96P71 396 aaPredicted RBP9.56□□□□□ -0.88
SVIP-204ENST00000530199 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 SPON2Q9BUD6 331 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
SVIP-204ENST00000530199 MINDY4BA8MYZ0 360 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 SMNDC1O75940 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
SVIP-204ENST00000530199 CELA3AP09093 270 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 MX2P20592 715 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 EIF4A3P38919 411 aaKnown RBP9.55□□□□□ -0.88
SVIP-204ENST00000530199 MAP3K11Q16584 847 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 FAM35AQ86V20 835 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 KLF15Q9UIH9 416 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 LTN1O94822 1766 aa9.55□□□□□ -0.88
SVIP-204ENST00000530199 CGNL1Q0VF96 1302 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms