RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 TMOD4Q9NZQ9 345 aa7.6□□□□□ -1.19
CHRNA6-202ENST00000529467 TNNQ9UQP3 1299 aa7.6□□□□□ -1.19
CHRNA6-202ENST00000529467 MYH1P12882 1939 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 POTEMA6NI47 508 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 GDF11O95390 407 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 GNAI2P04899 355 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 CYP2E1P05181 493 aaPredicted RBP7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 COL6A1P12109 1028 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 TRIM27P14373 513 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 PLCG2P16885 1265 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 MAPK4P31152 587 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 ERVK-9P63128 1117 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 ERVK-24P63145 666 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 CACNB2Q08289 660 aaPredicted RBP7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 GPR142Q7Z601 462 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 MAPKAPK5Q8IW41 473 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 TRMT44Q8IYL2 757 aaKnown RBP7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 TDHQ8IZJ6 230 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 SOCS4Q8WXH5 440 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 NOL10Q9BSC4 688 aaKnown RBP7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 PORCNQ9H237 461 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 SNRKQ9NRH2 765 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 PALD1Q9ULE6 856 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 ZBTB21Q9ULJ3 1066 aa7.59□□□□□ -1.19
CHRNA6-202ENST00000529467 FLT1P17948 1338 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 IPO8O15397 1037 aaKnown RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 IGSF3O75054 1194 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 CNMDO75829 334 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 CCND3P30281 292 aaPredicted RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 DYNLL1P63167 89 aaKnown RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 ATP8B2P98198 1209 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 PDE3AQ14432 1141 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 CCL14Q16627 93 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 TNNI3KQ59H18 835 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 CCDC158Q5M9N0 1113 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 TTC39AQ5SRH9 613 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L2Q6R6M4 530 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 Q7L0L9 218 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 DEFB123Q8N688 67 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 DBNDD2Q9BQY9 259 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 UBE2OQ9C0C9 1292 aaKnown RBP7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 MTMR10Q9NXD2 777 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 FPGT-TNNI3KV9GXZ4 949 aa7.58□□□□□ -1.2
CHRNA6-202ENST00000529467 BCAR3O75815 825 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 ZKSCAN1P17029 563 aaPredicted RBP7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 RGS2P41220 211 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 ZAP70P43403 619 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 MAP2K5Q13163 448 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 LRRC26Q2I0M4 334 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 TATDN1Q6P1N9 297 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 ATF7IPQ6VMQ6 1270 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 CATSPERGQ6ZRH7 1159 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 CRACR2BQ8N4Y2 399 aaPredicted RBP7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 SSH3Q8TE77 659 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 EDC3Q96F86 508 aaKnown RBP7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 C12orf42Q96LP6 360 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 PAGR1Q9BTK6 254 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 PIH1D3Q9NQM4 214 aaKnown RBP7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 SAP30BPQ9UHR5 308 aaKnown RBP7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 STXBP5LQ9Y2K9 1186 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 RABGAP1Q9Y3P9 1069 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 COL6A3P12111 3177 aa7.57□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 GH2P01242 217 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 IGHA2P01877 340 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 HLA-DOAP06340 250 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 CYP7A1P22680 504 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 PTPREP23469 700 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 LBX2Q6XYB7 198 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 CCAR1Q8IX12 1150 aaKnown RBP7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 TMEM57Q8N5G2 664 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 APBA2Q99767 749 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 TRIM34Q9BYJ4 488 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 CHMP4BQ9H444 224 aaKnown RBP7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 FLRT1Q9NZU1 646 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 NOP58Q9Y2X3 529 aaKnown RBP7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 FRMPD3Q5JV73 1810 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 MAST2Q6P0Q8 1798 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 SMCHD1A6NHR9 2005 aa7.56□□□□□ -1.2
CHRNA6-202ENST00000529467 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 ZNFX1Q9P2E3 1918 aaKnown RBP7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 SLC15A5A6NIM6 579 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 HOXC6P09630 235 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
CHRNA6-202ENST00000529467 CCNA1P78396 465 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms