RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 IQSEC3Q9UPP2 1182 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-218ENST00000528877 AKAP2Q9Y2D5 859 aa8.74□□□□□ -1.01
ITGB1-218ENST00000528877 PNMA6EA0A0J9YXQ4 647 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 UBE2Q2LH0YL09 131 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 PPP1R12BO60237 982 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 ADH1CP00326 375 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 ZBTB48P10074 688 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 RLBP1P12271 317 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 RBM5P52756 815 aaKnown RBP eCLIP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 RASA3Q14644 834 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 MVPQ14764 893 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 NOM1Q5C9Z4 860 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 APOBEC3HQ6NTF7 200 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 FTSJ3Q8IY81 847 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 SSH3Q8TE77 659 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 CSRNP1Q96S65 589 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 VEZTQ9HBM0 779 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 GNL3LQ9NVN8 582 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
ITGB1-218ENST00000528877 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 AKAP11Q9UKA4 1901 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 GAKO14976 1311 aa8.73□□□□□ -1.01
ITGB1-218ENST00000528877 A0A1B0GUL7 405 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 ST8SIA5O15466 376 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 PRKCSHP14314 528 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 PRDX5P30044 214 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 ADORA1P30542 326 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 PHKA1P46020 1223 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 TM4SF4P48230 202 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 TNNI2P48788 182 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 INSM1Q01101 510 aaPredicted RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 PTK2Q05397 1052 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 SREBF2Q12772 1141 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 TFCP2Q12800 502 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 NR5A1Q13285 461 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 RASGRF1Q13972 1273 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 NR6A1Q15406 480 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 ZGPATQ8N5A5 531 aaKnown RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 HPS1Q92902 700 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 TDRD3Q9H7E2 651 aaKnown RBP8.72□□□□□ -1.01
ITGB1-218ENST00000528877 GPR108Q9NPR9 543 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 RNF186Q9NXI6 227 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
ITGB1-218ENST00000528877 COL2A1P02458 1487 aaPredicted RBP8.71□□□□□ -1.01
ITGB1-218ENST00000528877 ZBTB7BO15156 539 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 IGSF3O75054 1194 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 NBPF12Q5TAG4 269 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 HOOK2Q96ED9 719 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 ARHGAP9Q9BRR9 750 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 TMEM39BQ9GZU3 492 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 TMOD2Q9NZR1 351 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 ANGEL1Q9UNK9 670 aaKnown RBP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 DAGLAQ9Y4D2 1042 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-218ENST00000528877 ATRNL1Q5VV63 1379 aa8.71□□□□□ -1.02
ITGB1-218ENST00000528877 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 MANSC4A6NHS7 340 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-218ENST00000528877 USP2O75604 605 aaPredicted RBP8.7□□□□□ -1.02
ITGB1-218ENST00000528877 LDHBP07195 334 aaKnown RBP8.7□□□□□ -1.02
ITGB1-218ENST00000528877 INHBEP58166 350 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 ITPRIPQ8IWB1 547 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 WNK4Q96J92 1243 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 CLMNQ96JQ2 1002 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 DOCK2Q92608 1830 aa8.7□□□□□ -1.02
ITGB1-218ENST00000528877 TCP10L2B9ZVM9 353 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 TRPA1O75762 1119 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-218ENST00000528877 TIMM10P62072 90 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 ATP8B2P98198 1209 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 NNTQ13423 1086 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 SPTY2D1Q68D10 685 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-218ENST00000528877 CDC42EP5Q6NZY7 148 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 CEP85Q6P2H3 762 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-218ENST00000528877 ZBTB33Q86T24 672 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 ZNF512BQ96KM6 892 aaPredicted RBP8.69□□□□□ -1.02
ITGB1-218ENST00000528877 IDI2Q9BXS1 227 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 FZD1Q9UP38 647 aa8.69□□□□□ -1.02
ITGB1-218ENST00000528877 UQCRFS1P1P0C7P4 283 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 CACNB3P54284 484 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 G3BP1Q13283 466 aaKnown RBP eCLIP8.68□□□□□ -1.02
ITGB1-218ENST00000528877 PRKG1Q13976 671 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 VGLL4Q14135 290 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 TNNI3KQ59H18 835 aa8.68□□□□□ -1.02
ITGB1-218ENST00000528877 DZIP1Q86YF9 867 aaKnown RBP8.68□□□□□ -1.02
ITGB1-218ENST00000528877 SPATA5Q8NB90 893 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms