RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 LMNB2Q03252 620 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 FAM160A1Q05DH4 1040 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 INPP5AQ14642 412 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ZBTB37Q5TC79 503 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ANGEL2Q5VTE6 544 aaKnown RBP4.85□□□□□ -1.63
BRCA2-203ENST00000528762 TTBK2Q6IQ55 1244 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 LLGL2Q6P1M3 1020 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.85□□□□□ -1.63
BRCA2-203ENST00000528762 CDC37L1Q7L3B6 337 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ARMCX6Q7L4S7 300 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 SPACA3Q8IXA5 215 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 GOLM1Q8NBJ4 401 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ELMO3Q96BJ8 720 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ZSWIM4Q9H7M6 989 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 FBRSQ9HAH7 460 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 KCNQ5Q9NR82 932 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 GINM1Q9NU53 330 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 EFR3BQ9Y2G0 817 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 SAMM50Q9Y512 469 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 CNTNAP4Q9C0A0 1308 aa4.85□□□□□ -1.63
BRCA2-203ENST00000528762 ROBO2Q9HCK4 1378 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 EOMESO95936 686 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 GARTP22102 1010 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
BRCA2-203ENST00000528762 ZP2Q05996 745 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 SERINC3Q13530 473 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 COL9A2Q14055 689 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-203ENST00000528762 NKPD1Q17RQ9 610 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 SNAP47Q5SQN1 464 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 CDKAL1Q5VV42 579 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 PCNX4Q63HM2 1172 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 LRFN4Q6PJG9 635 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 AGMOQ6ZNB7 445 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 ATG4DQ86TL0 474 aaPredicted RBP4.84□□□□□ -1.63
BRCA2-203ENST00000528762 CKAP2LQ8IYA6 745 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 NLGN1Q8N2Q7 840 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 XAGE3Q8WTP9 111 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 CPLX3Q8WVH0 158 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 NKD1Q969G9 470 aa4.84□□□□□ -1.63
BRCA2-203ENST00000528762 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.84□□□□□ -1.63
BRCA2-203ENST00000528762 GNAT3A8MTJ3 354 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 FYB2Q5VWT5 728 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 DIEXFQ68CQ4 756 aaKnown RBP4.83□□□□□ -1.64
BRCA2-203ENST00000528762 JARID2Q92833 1246 aaPredicted RBP4.83□□□□□ -1.64
BRCA2-203ENST00000528762 PLPPR2Q96GM1 343 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 RHOVQ96L33 236 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 OSBPL2Q9H1P3 480 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 TNKS2Q9H2K2 1166 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 CACNA2D2Q9NY47 1150 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 STRIP2Q9ULQ0 834 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 CYP8B1Q9UNU6 501 aa4.83□□□□□ -1.64
BRCA2-203ENST00000528762 TRIM37O94972 964 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 SLITRK5O94991 958 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 TFE3P19532 575 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 ETFBP38117 255 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 SOX9P48436 509 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 APOBRQ0VD83 1088 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 LRRC14Q15048 493 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 NKG7Q16617 165 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 MLANAQ16655 118 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 SLC23A3Q6PIS1 610 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 FAM196AQ6ZSG2 479 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 CCDC84Q86UT8 332 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 RIN3Q8TB24 985 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 LIN37Q96GY3 246 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 HSPA12BQ96MM6 686 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 MIPEPQ99797 713 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 CARS2Q9HA77 564 aaKnown RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 MKNK2Q9HBH9 465 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 PRDM5Q9NQX1 630 aaPredicted RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 UBP1Q9NZI7 540 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
BRCA2-203ENST00000528762 MRVI1Q9Y6F6 885 aa4.82□□□□□ -1.64
BRCA2-203ENST00000528762 PITPNM2Q9BZ72 1349 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 LRRC10BA6NIK2 292 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 FAM155AB1AL88 458 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-203ENST00000528762 H3BS24 57 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 FARP2O94887 1054 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-203ENST00000528762 CBX7O95931 251 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 RING1Q06587 406 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 NFE2L2Q16236 605 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 KCNMB1Q16558 191 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 WIPI1Q5MNZ9 446 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-203ENST00000528762 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 NBPF6Q5VWK0 638 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 ZNF746Q6NUN9 644 aaPredicted RBP4.81□□□□□ -1.64
BRCA2-203ENST00000528762 ZNF662Q6ZS27 426 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 KSR1Q8IVT5 923 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 SLITRK4Q8IW52 837 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 MIR1-1HGQ9H1L0 117 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 ZNF408Q9H9D4 720 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 R3HCC1Q9Y3T6 440 aaKnown RBP4.81□□□□□ -1.64
BRCA2-203ENST00000528762 PCDHB5Q9Y5E4 795 aa4.81□□□□□ -1.64
BRCA2-203ENST00000528762 ZNF503-AS2A6NEH8 195 aa4.8□□□□□ -1.64
BRCA2-203ENST00000528762 FANCGO15287 622 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms