RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 PDILTQ8N807 584 aa26.68■■□□□ 1.86
GSDMD-208ENST00000528475 CDCA7Q9BWT1 371 aaPredicted RBP26.68■■□□□ 1.86
GSDMD-208ENST00000528475 UBE4AQ14139 1066 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 CATIPQ7Z7H3 387 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 SAMSN1Q9NSI8 373 aaKnown RBP26.67■■□□□ 1.86
GSDMD-208ENST00000528475 ATP6V1AP38606 617 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 BMS1Q14692 1282 aaKnown RBP26.67■■□□□ 1.86
GSDMD-208ENST00000528475 PTPN21Q16825 1174 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 UBXN4Q92575 508 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 VPS54Q9P1Q0 977 aa26.67■■□□□ 1.86
GSDMD-208ENST00000528475 COL1A1P02452 1464 aaPredicted RBP26.66■■□□□ 1.86
GSDMD-208ENST00000528475 EFCAB8A8MWE9 144 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 TADA3O75528 432 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 TPM1P09493 284 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 ATP2B1P20020 1258 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 ARHGAP29Q52LW3 1261 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 SPATA1Q5VX52 437 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 URI1O94763 535 aaPredicted RBP26.66■■□□□ 1.86
GSDMD-208ENST00000528475 HSP90AA4PQ58FG1 418 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 IFIT1BQ5T764 474 aaKnown RBP26.66■■□□□ 1.86
GSDMD-208ENST00000528475 MNS1Q8NEH6 495 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 DHX58Q96C10 678 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 ABCF2Q9UG63 623 aa26.66■■□□□ 1.86
GSDMD-208ENST00000528475 COL4A1P02462 1669 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 A0A087X0B3 334 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 SEMA3EO15041 775 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 TOM1O60784 492 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 DDAH1O94760 285 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 CLCN6P51797 869 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 CUL4BQ13620 913 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 APTXQ7Z2E3 356 aaKnown RBP26.65■■□□□ 1.86
GSDMD-208ENST00000528475 TNFRSF25Q93038 417 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 GSDMAQ96QA5 445 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 PANX2Q96RD6 677 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 BRMS1Q9HCU9 246 aa26.65■■□□□ 1.86
GSDMD-208ENST00000528475 LOC102724428A0A0B4J2F2 783 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 FAM205CA6NFA0 338 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 NPHP1O15259 732 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 SIK1P57059 783 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 TROAPQ12815 778 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 IQCA1Q86XH1 822 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 PAGE5Q96GU1 130 aa26.64■■□□□ 1.86
GSDMD-208ENST00000528475 ZHX1Q9UKY1 873 aaPredicted RBP26.64■■□□□ 1.86
GSDMD-208ENST00000528475 ADKP55263 362 aaKnown RBP26.64■■□□□ 1.85
GSDMD-208ENST00000528475 SCN7AQ01118 1682 aa26.64■■□□□ 1.85
GSDMD-208ENST00000528475 EARS2Q5JPH6 523 aaKnown RBP26.64■■□□□ 1.85
GSDMD-208ENST00000528475 ADAMTS2O95450 1211 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 CASQ1P31415 396 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 FAM193AP78312 1265 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 MAP3K9P80192 1104 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 DPYDQ12882 1025 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 ITPK1Q13572 414 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 EPSTI1Q96J88 318 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 ARGLU1Q9NWB6 273 aaPredicted RBP26.63■■□□□ 1.85
GSDMD-208ENST00000528475 IQSEC3Q9UPP2 1182 aaPredicted RBP26.63■■□□□ 1.85
GSDMD-208ENST00000528475 MYH2Q9UKX2 1941 aa26.63■■□□□ 1.85
GSDMD-208ENST00000528475 PLEKHA8P1O95397 391 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 GYG1P46976 350 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 CDKAL1Q5VV42 579 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 TOGARAM2Q6ZUX3 1019 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 TMTC3Q6ZXV5 915 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 ANKRD18AQ8IVF6 992 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 SYMPKQ92797 1274 aaKnown RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 ZNF652Q9Y2D9 606 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 V9GY48 417 aaPredicted RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 MYH14Q7Z406 1995 aaKnown RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 AKR1B15C9JRZ8 316 aaPredicted RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 SF3B3Q15393 1217 aaKnown RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 NPY5RQ15761 445 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 CARD6Q9BX69 1037 aa26.62■■□□□ 1.85
GSDMD-208ENST00000528475 NAA15Q9BXJ9 866 aaKnown RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 BSDC1Q9NW68 430 aaPredicted RBP26.62■■□□□ 1.85
GSDMD-208ENST00000528475 SYNRGQ9UMZ2 1314 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 SMIM22K7EJ46 135 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 PBX1P40424 430 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 CTAGE1Q96RT6 745 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 GNG11P61952 73 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 TERF2Q15554 542 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 CAVIN4Q5BKX8 364 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.61■■□□□ 1.85
GSDMD-208ENST00000528475 FHOD1Q9Y613 1164 aa26.61■■□□□ 1.85
GSDMD-208ENST00000528475 ORC4O43929 436 aa26.6■■□□□ 1.85
GSDMD-208ENST00000528475 PRDM1O75626 825 aa26.6■■□□□ 1.85
GSDMD-208ENST00000528475 ZRANB2O95218 330 aaKnown RBP eCLIP26.6■■□□□ 1.85
GSDMD-208ENST00000528475 CD44P16070 742 aaKnown RBP26.6■■□□□ 1.85
GSDMD-208ENST00000528475 DYNLL1P63167 89 aaKnown RBP26.6■■□□□ 1.85
GSDMD-208ENST00000528475 ATP2C1P98194 919 aaPredicted RBP26.6■■□□□ 1.85
GSDMD-208ENST00000528475 TTC38Q5R3I4 469 aa26.6■■□□□ 1.85
GSDMD-208ENST00000528475 CLEC4GQ6UXB4 293 aa26.6■■□□□ 1.85
GSDMD-208ENST00000528475 ADD3Q9UEY8 706 aaKnown RBP26.6■■□□□ 1.85
GSDMD-208ENST00000528475 CNTNAP5Q8WYK1 1306 aa26.6■■□□□ 1.85
GSDMD-208ENST00000528475 CTR9Q6PD62 1173 aa26.59■■□□□ 1.85
GSDMD-208ENST00000528475 KIFC2Q96AC6 838 aa26.59■■□□□ 1.85
GSDMD-208ENST00000528475 WDR24Q96S15 920 aa26.59■■□□□ 1.85
GSDMD-208ENST00000528475 PYM1Q9BRP8 204 aaKnown RBP26.59■■□□□ 1.85
GSDMD-208ENST00000528475 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
GSDMD-208ENST00000528475 MRFAP1Q9Y605 127 aa26.59■■□□□ 1.85
GSDMD-208ENST00000528475 BAZ2AQ9UIF9 1905 aaKnown RBP26.59■■□□□ 1.85
GSDMD-208ENST00000528475 PPP1R3GB7ZBB8 358 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms