RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 FEZ1Q99689 392 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 MCM9Q9NXL9 1143 aa18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 RBM27Q9P2N5 1060 aaKnown RBP18.84■□□□□ 0.61
CLNS1A-210ENST00000528364 RPTORQ8N122 1335 aa18.83■□□□□ 0.61
CLNS1A-210ENST00000528364 PRKAB2O43741 272 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 HMMRO75330 724 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 CHGBP05060 677 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 SEPT2Q15019 361 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 C12orf42Q96LP6 360 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 NUDT12Q9BQG2 462 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 CRNKL1Q9BZJ0 848 aaKnown RBP18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 ARMT1Q9H993 441 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 HMX1Q9NP08 348 aaPredicted RBP18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 CABP5Q9NP86 173 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 RCAN3Q9UKA8 241 aa18.83■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L15C9J2P7 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L13C9JLJ4 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L11C9JVI0 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L18D6R9N7 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L22D6RA61 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L17D6RBQ6 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L19D6RCP7 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L20D6RJB6 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 SMIM22K7EJ46 135 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 GABPAQ06546 454 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP17L24Q0WX57 530 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 CCL14Q16627 93 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 TMED8Q6PL24 325 aaPredicted RBP18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 CATSPERGQ6ZRH7 1159 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 GPR142Q7Z601 462 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 USP6NLQ92738 828 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 KIAA1683Q9H0B3 1180 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 NR2E3Q9Y5X4 410 aa18.82■□□□□ 0.6
CLNS1A-210ENST00000528364 EVI5O60447 810 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 VCAM1P19320 739 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 MAPK4P31152 587 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 MORN1Q5T089 497 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 PLEKHH3Q7Z736 793 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 CCAR1Q8IX12 1150 aaKnown RBP18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 SLC44A5Q8NCS7 719 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 DYNLL2Q96FJ2 89 aa18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 DCP1AQ9NPI6 582 aaPredicted RBP18.81■□□□□ 0.6
CLNS1A-210ENST00000528364 A0A1W2PRG0 241 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 MPHOSPH10O00566 681 aaKnown RBP18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 SMARCA5O60264 1052 aaPredicted RBP18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 PRKAR2AP13861 404 aaKnown RBP18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 USP14P54578 494 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 NECAB2Q7Z6G3 386 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 RABGAP1Q9Y3P9 1069 aa18.8■□□□□ 0.6
CLNS1A-210ENST00000528364 XRCC5P13010 732 aaKnown RBP18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 ATP5JP18859 108 aa18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 PDE3AQ14432 1141 aa18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 MAP3K21Q5TCX8 1036 aa18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 GTF3C2Q8WUA4 911 aaPredicted RBP18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 PRO3102Q9H379 93 aa18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 RPAP3Q9H6T3 665 aaPredicted RBP18.79■□□□□ 0.6
CLNS1A-210ENST00000528364 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 MBD4O95243 580 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 CCND3P30281 292 aaPredicted RBP18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 ADD2P35612 726 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 KIAA1755Q5JYT7 1200 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 WDR78Q5VTH9 848 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 SOCS4Q8WXH5 440 aa18.78■□□□□ 0.6
CLNS1A-210ENST00000528364 ALPK3Q96L96 1907 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 SPDYE16A6NNV3 312 aaPredicted RBP18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 CAPN2P17655 700 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 RGS2P41220 211 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 CLEC10AQ8IUN9 316 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 SIAH1Q8IUQ4 282 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 HAUS7Q99871 368 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 CWC22Q9HCG8 908 aaKnown RBP18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 FLRT1Q9NZU1 646 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 STAP2Q9UGK3 403 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 OGDHLQ9ULD0 1010 aa18.77■□□□□ 0.6
CLNS1A-210ENST00000528364 NAV1Q8NEY1 1877 aa18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 AKR1B1P15121 316 aa18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 MAP2K5Q13163 448 aa18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 ANKLE1Q8NAG6 615 aa18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 NBPF3Q9H094 633 aa18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 DDX60LQ5H9U9 1706 aaKnown RBP18.76■□□□□ 0.59
CLNS1A-210ENST00000528364 PTPREP23469 700 aa18.75■□□□□ 0.59
CLNS1A-210ENST00000528364 CCNA1P78396 465 aa18.75■□□□□ 0.59
CLNS1A-210ENST00000528364 LHX8Q68G74 356 aa18.75■□□□□ 0.59
CLNS1A-210ENST00000528364 C7orf61Q8IZ16 206 aa18.75■□□□□ 0.59
CLNS1A-210ENST00000528364 ZMYND8Q9ULU4 1186 aaPredicted RBP18.75■□□□□ 0.59
CLNS1A-210ENST00000528364 USP17L12C9JPN9 530 aa18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 USP17L21D6R901 530 aa18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 LBX2Q6XYB7 198 aa18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 TRMT44Q8IYL2 757 aaKnown RBP18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 NPLOC4Q8TAT6 608 aa18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 APBA2Q99767 749 aa18.74■□□□□ 0.59
CLNS1A-210ENST00000528364 LRRCC1Q9C099 1032 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms