RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 BAG3O95817 575 aa13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 PLCG2P16885 1265 aa13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 PPP4CP60510 307 aa13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 CWC27Q6UX04 472 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 TDHQ8IZJ6 230 aa13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-210ENST00000528149 MGAMO43451 1857 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 HIP1O00291 1037 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 IRF6O14896 467 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 CHMLP26374 656 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 SNAPC2Q13487 334 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 PAWRQ96IZ0 340 aaKnown RBP13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 IL25Q9H293 177 aa13.84□□□□□ -0.19
CCDC90B-210ENST00000528149 COL2A1P02458 1487 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 CDC45O75419 566 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 SYN1P17600 705 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 COL9A1P20849 921 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 SLC44A5Q8NCS7 719 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 DEFB118Q96PH6 123 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 CRNKL1Q9BZJ0 848 aaKnown RBP13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 HELLSQ9NRZ9 838 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
CCDC90B-210ENST00000528149 GDF11O95390 407 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 INHAP05111 366 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 ELNP15502 786 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 USP5P45974 858 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 PLCD1P51178 756 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 MCMDC2Q4G0Z9 681 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 CERS3Q8IU89 383 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 RAPGEFL1Q9UHV5 662 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 SLC4A4Q9Y6R1 1079 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 CCDC171Q6TFL3 1326 aa13.82□□□□□ -0.2
CCDC90B-210ENST00000528149 FOXP2O15409 715 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 ERO1BQ86YB8 467 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 FAM161BQ96MY7 647 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 EPB41L4AQ9HCS5 686 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 PAK6Q9NQU5 681 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 PTPRFP10586 1907 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 RAD50Q92878 1312 aa13.81□□□□□ -0.2
CCDC90B-210ENST00000528149 PDHXO00330 501 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 ADCY3O60266 1144 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 FCGRTP55899 365 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 MAP3K10Q02779 954 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 PPIL2Q13356 520 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 MOGSQ13724 837 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 DCAF15Q66K64 600 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 CLEC10AQ8IUN9 316 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 CRISPLD2Q9H0B8 497 aa13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC90B-210ENST00000528149 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 SGSM2O43147 1006 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 ESYT1Q9BSJ8 1104 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 DCP1AQ9NPI6 582 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 CDH23Q9H251 3354 aa13.79□□□□□ -0.2
CCDC90B-210ENST00000528149 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 APPP05067 770 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 BCRP11274 1271 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 GNAT2P19087 354 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 FLT3LGP49771 235 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 NOL9Q5SY16 702 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
CCDC90B-210ENST00000528149 CAPN2P17655 700 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 PTPRAP18433 802 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 SHMT1P34896 483 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 TDO2P48775 406 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 MFAP1P55081 439 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 FAM109BQ6ICB4 259 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
CCDC90B-210ENST00000528149 LOC285556D6RIA3 1793 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 PEX10O60683 326 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 CYP2C8P10632 490 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 HSPD1P10809 573 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 IFNL3Q8IZI9 196 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 PXYLP1Q8TE99 480 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 NAPBQ9H115 298 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
CCDC90B-210ENST00000528149 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms