RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 PRKAR2AP13861 404 aaKnown RBP20.9■□□□□ 0.94
ATM-213ENST00000527891 PLCD1P51178 756 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 ABCB5Q2M3G0 1257 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
ATM-213ENST00000527891 POTEEQ6S8J3 1075 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 GPR142Q7Z601 462 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 CLASRPQ8N2M8 674 aaKnown RBP20.9■□□□□ 0.94
ATM-213ENST00000527891 KIAA1683Q9H0B3 1180 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 CABP5Q9NP86 173 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 ZKSCAN1P17029 563 aaPredicted RBP20.89■□□□□ 0.93
ATM-213ENST00000527891 SHMT1P34896 483 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 RGS2P41220 211 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 SLC9C2Q5TAH2 1124 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 PLEKHH3Q7Z736 793 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 USP6NLQ92738 828 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 KIF1BPQ96EK5 621 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 NBPF3Q9H094 633 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 CWC22Q9HCG8 908 aaKnown RBP20.89■□□□□ 0.93
ATM-213ENST00000527891 OGDHLQ9ULD0 1010 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 RABGAP1Q9Y3P9 1069 aa20.89■□□□□ 0.93
ATM-213ENST00000527891 DDX60LQ5H9U9 1706 aaKnown RBP20.89■□□□□ 0.93
ATM-213ENST00000527891 A0A1W2PPC1 479 aa20.88■□□□□ 0.93
ATM-213ENST00000527891 POLR3DP05423 398 aaPredicted RBP20.88■□□□□ 0.93
ATM-213ENST00000527891 PDE6AP16499 860 aa20.88■□□□□ 0.93
ATM-213ENST00000527891 VCAM1P19320 739 aa20.88■□□□□ 0.93
ATM-213ENST00000527891 MORN1Q5T089 497 aa20.88■□□□□ 0.93
ATM-213ENST00000527891 RPAP2Q8IXW5 612 aaPredicted RBP20.88■□□□□ 0.93
ATM-213ENST00000527891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATM-213ENST00000527891 APBA2Q99767 749 aa20.88■□□□□ 0.93
ATM-213ENST00000527891 CRNKL1Q9BZJ0 848 aaKnown RBP20.88■□□□□ 0.93
ATM-213ENST00000527891 APBB1O00213 710 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 HMMRO75330 724 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 IFIT2P09913 472 aaKnown RBP20.87■□□□□ 0.93
ATM-213ENST00000527891 MNX1P50219 401 aaPredicted RBP20.87■□□□□ 0.93
ATM-213ENST00000527891 CCNA1P78396 465 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 CATSPERGQ6ZRH7 1159 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 ACER1Q8TDN7 264 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 DNAJC2Q99543 621 aaKnown RBP20.87■□□□□ 0.93
ATM-213ENST00000527891 C11orf49Q9H6J7 331 aa20.87■□□□□ 0.93
ATM-213ENST00000527891 ZNF532Q9HCE3 1301 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 GOLIM4O00461 696 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 CNMDO75829 334 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 GABPAQ06546 454 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 CACNB2Q08289 660 aaPredicted RBP20.86■□□□□ 0.93
ATM-213ENST00000527891 C7orf61Q8IZ16 206 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 DDX19BQ9UMR2 479 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 NAV1Q8NEY1 1877 aa20.86■□□□□ 0.93
ATM-213ENST00000527891 ALPK3Q96L96 1907 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
ATM-213ENST00000527891 GUCY1A2P33402 732 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 MAP2K5Q13163 448 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 CCL14Q16627 93 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
ATM-213ENST00000527891 LAMA3Q16787 3333 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 SEPT2Q15019 361 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 RPAP3Q9H6T3 665 aaPredicted RBP20.84■□□□□ 0.93
ATM-213ENST00000527891 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 COG6Q9Y2V7 657 aa20.84■□□□□ 0.93
ATM-213ENST00000527891 MPHOSPH10O00566 681 aaKnown RBP20.83■□□□□ 0.93
ATM-213ENST00000527891 RAB11FIP3O75154 756 aa20.83■□□□□ 0.93
ATM-213ENST00000527891 CCND3P30281 292 aaPredicted RBP20.83■□□□□ 0.93
ATM-213ENST00000527891 WDR78Q5VTH9 848 aa20.83■□□□□ 0.93
ATM-213ENST00000527891 SIRT2Q8IXJ6 389 aa20.83■□□□□ 0.93
ATM-213ENST00000527891 LCORLQ8N3X6 602 aa20.83■□□□□ 0.93
ATM-213ENST00000527891 EDC3Q96F86 508 aaKnown RBP20.83■□□□□ 0.93
ATM-213ENST00000527891 BCL11AQ9H165 835 aa20.83■□□□□ 0.93
ATM-213ENST00000527891 DCP1AQ9NPI6 582 aaPredicted RBP20.83■□□□□ 0.93
ATM-213ENST00000527891 SPDYE16A6NNV3 312 aaPredicted RBP20.82■□□□□ 0.92
ATM-213ENST00000527891 PTPREP23469 700 aa20.82■□□□□ 0.92
ATM-213ENST00000527891 EVX2Q03828 476 aa20.82■□□□□ 0.92
ATM-213ENST00000527891 GDF15Q99988 308 aa20.82■□□□□ 0.92
ATM-213ENST00000527891 BTBD7Q9P203 1132 aa20.82■□□□□ 0.92
ATM-213ENST00000527891 ZMYND8Q9ULU4 1186 aaPredicted RBP20.82■□□□□ 0.92
ATM-213ENST00000527891 PFASO15067 1338 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 SLC15A5A6NIM6 579 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 LHX8Q68G74 356 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 CHMP4BQ9H444 224 aaKnown RBP20.81■□□□□ 0.92
ATM-213ENST00000527891 PAG1Q9NWQ8 432 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 SWAP70Q9UH65 585 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 IVNS1ABPQ9Y6Y0 642 aa20.81■□□□□ 0.92
ATM-213ENST00000527891 A0A1W2PRG0 241 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 BMP8BP34820 402 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 GRB14Q14449 540 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 MFSD14CQ5VZR4 134 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 TMEM179Q6ZVK1 233 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 BOLA2Q9H3K6 86 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 ARMT1Q9H993 441 aa20.8■□□□□ 0.92
ATM-213ENST00000527891 HOXC6P09630 235 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 CYP2D6P10635 497 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 COL6A1P12109 1028 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 ADD2P35612 726 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 SLC44A5Q8NCS7 719 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 FLRT1Q9NZU1 646 aa20.79■□□□□ 0.92
ATM-213ENST00000527891 SOX1O00570 391 aaPredicted RBP20.78■□□□□ 0.92
ATM-213ENST00000527891 MBD4O95243 580 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms