RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 EVI5O60447 810 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 FXR1P51114 621 aaKnown RBP eCLIP27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP14P54578 494 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 ERVK-9P63128 1117 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 ERVK-24P63145 666 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L24Q0WX57 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 SIRT2Q8IXJ6 389 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 PAWRQ96IZ0 340 aaKnown RBP27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 CRISPLD2Q9H0B8 497 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 ZNF532Q9HCE3 1301 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 TRIM32Q13049 653 aa27.1■■□□□ 1.93
TRAPPC4-208ENST00000527680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.1■■□□□ 1.93
TRAPPC4-208ENST00000527680 RCAN3Q9UKA8 241 aa27.1■■□□□ 1.93
TRAPPC4-208ENST00000527680 MPHOSPH10O00566 681 aaKnown RBP27.09■■□□□ 1.93
TRAPPC4-208ENST00000527680 NECAB2Q7Z6G3 386 aa27.09■■□□□ 1.93
TRAPPC4-208ENST00000527680 SOCS4Q8WXH5 440 aa27.09■■□□□ 1.93
TRAPPC4-208ENST00000527680 BOLA2Q9H3K6 86 aa27.09■■□□□ 1.93
TRAPPC4-208ENST00000527680 SHMT1P34896 483 aa27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 ACER1Q8TDN7 264 aa27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 TRIB2Q92519 343 aa27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 EDC3Q96F86 508 aaKnown RBP27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 C12orf42Q96LP6 360 aa27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 PORCNQ9H237 461 aa27.08■■□□□ 1.93
TRAPPC4-208ENST00000527680 WDR78Q5VTH9 848 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 GPR142Q7Z601 462 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 PLEKHH3Q7Z736 793 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 SDR42E1Q8WUS8 393 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 KIAA1683Q9H0B3 1180 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 RABGAP1Q9Y3P9 1069 aa27.07■■□□□ 1.92
TRAPPC4-208ENST00000527680 XRCC5P13010 732 aaKnown RBP27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 CCNA1P78396 465 aa27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 CATSPERGQ6ZRH7 1159 aa27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 TRMT44Q8IYL2 757 aaKnown RBP27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 PAG1Q9NWQ8 432 aa27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 RBM27Q9P2N5 1060 aaKnown RBP27.06■■□□□ 1.92
TRAPPC4-208ENST00000527680 PRKAR2AP13861 404 aaKnown RBP27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 ZKSCAN1P17029 563 aaPredicted RBP27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 RGS2P41220 211 aa27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 SEPT2Q15019 361 aa27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 LCORLQ8N3X6 602 aa27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 DIS3LQ8TF46 1054 aaKnown RBP27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 ARMT1Q9H993 441 aa27.05■■□□□ 1.92
TRAPPC4-208ENST00000527680 TRIOBPQ9H2D6 2365 aa27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 TCRBV5S4A2TA0A5A2 114 aa27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 GLRX3O76003 335 aaKnown RBP27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 VCAM1P19320 739 aa27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 ANKLE1Q8NAG6 615 aa27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 DCP1AQ9NPI6 582 aaPredicted RBP27.04■■□□□ 1.92
TRAPPC4-208ENST00000527680 PLXNB2O15031 1838 aa27.03■■□□□ 1.92
TRAPPC4-208ENST00000527680 GABPAQ06546 454 aa27.03■■□□□ 1.92
TRAPPC4-208ENST00000527680 POTEEQ6S8J3 1075 aa27.03■■□□□ 1.92
TRAPPC4-208ENST00000527680 NBPF3Q9H094 633 aa27.03■■□□□ 1.92
TRAPPC4-208ENST00000527680 RPAP3Q9H6T3 665 aaPredicted RBP27.03■■□□□ 1.92
TRAPPC4-208ENST00000527680 ATP5JP18859 108 aa27.02■■□□□ 1.92
TRAPPC4-208ENST00000527680 GUCY1A2P33402 732 aa27.02■■□□□ 1.92
TRAPPC4-208ENST00000527680 EVX2Q03828 476 aa27.02■■□□□ 1.92
TRAPPC4-208ENST00000527680 MORN1Q5T089 497 aa27.02■■□□□ 1.92
TRAPPC4-208ENST00000527680 CYP2D6P10635 497 aa27.01■■□□□ 1.91
TRAPPC4-208ENST00000527680 CACNB2Q08289 660 aaPredicted RBP27.01■■□□□ 1.91
TRAPPC4-208ENST00000527680 SLFNL1Q499Z3 407 aa27.01■■□□□ 1.91
TRAPPC4-208ENST00000527680 IVNS1ABPQ9Y6Y0 642 aa27.01■■□□□ 1.91
TRAPPC4-208ENST00000527680 NAV1Q8NEY1 1877 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 PRKAB2O43741 272 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 CNMDO75829 334 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 MBD4O95243 580 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 ADD2P35612 726 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 CCL14Q16627 93 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 AMOTL1Q8IY63 956 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 USP6NLQ92738 828 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 HAUS7Q99871 368 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 LRRCC1Q9C099 1032 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 SWAP70Q9UH65 585 aa27■■□□□ 1.91
TRAPPC4-208ENST00000527680 MAP2K5Q13163 448 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 MAP3K21Q5TCX8 1036 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 SLC44A5Q8NCS7 719 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 DYNLL2Q96FJ2 89 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 DDRGK1Q96HY6 314 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 APBA2Q99767 749 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 ATP8A2Q9NTI2 1148 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 HOXC10Q9NYD6 342 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 OGDHLQ9ULD0 1010 aa26.99■■□□□ 1.91
TRAPPC4-208ENST00000527680 COG2Q14746 738 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 C20orf194Q5TEA3 1177 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 TMEM179Q6ZVK1 233 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 TANGO6Q9C0B7 1094 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 C11orf49Q9H6J7 331 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 BTBD7Q9P203 1132 aa26.98■■□□□ 1.91
TRAPPC4-208ENST00000527680 A0A1W2PRG0 241 aa26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 SPDYE16A6NNV3 312 aaPredicted RBP26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 SMARCA5O60264 1052 aaPredicted RBP26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 ZSCAN25Q6NSZ9 544 aa26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 C7orf61Q8IZ16 206 aa26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 STAP2Q9UGK3 403 aa26.97■■□□□ 1.91
TRAPPC4-208ENST00000527680 SLC15A5A6NIM6 579 aa26.96■■□□□ 1.91
TRAPPC4-208ENST00000527680 PTPREP23469 700 aa26.96■■□□□ 1.91
TRAPPC4-208ENST00000527680 CCND3P30281 292 aaPredicted RBP26.96■■□□□ 1.91
TRAPPC4-208ENST00000527680 ATP2B2Q01814 1243 aa26.96■■□□□ 1.91
TRAPPC4-208ENST00000527680 MFSD14CQ5VZR4 134 aa26.96■■□□□ 1.91
TRAPPC4-208ENST00000527680 LBX2Q6XYB7 198 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms