RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GSTT1P30711 240 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 PTPN11Q06124 597 aaPredicted RBP5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 HDXQ7Z353 690 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 USTQ9Y2C2 406 aa5.34□□□□□ -1.55
CLNS1A-209ENST00000527299 WASH4PA8MWX3 477 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 DSC3Q14574 896 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 TCERG1LQ5VWI1 586 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 PRAMEF13Q5VWM6 474 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 CDH24Q86UP0 819 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 TXNDC2Q86VQ3 553 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 CREG2Q8IUH2 290 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 PDZD8Q8NEN9 1154 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 SRCIN1Q9C0H9 1055 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 DUSP15Q9H1R2 295 aaPredicted RBP5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 SLC6A17Q9H1V8 727 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 C19orf44Q9H6X5 657 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 GCM1Q9NP62 436 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 RTEL1Q9NZ71 1219 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 SNCAIPQ9Y6H5 919 aa5.33□□□□□ -1.56
CLNS1A-209ENST00000527299 TEX51A0A1B0GUA7 166 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 FBXO24O75426 580 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 ZGLP1P0C6A0 271 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 KRTAP10-2P60368 255 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 ETF1P62495 437 aaKnown RBP5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 NFIXQ14938 502 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 PCNX4Q63HM2 1172 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 TMC7Q7Z402 723 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 ZNF605Q86T29 641 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 XAGE3Q8WTP9 111 aa5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 ZNF552Q9H707 407 aaPredicted RBP5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 CNOT6Q9ULM6 557 aaKnown RBP5.32□□□□□ -1.56
CLNS1A-209ENST00000527299 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 PNMA6FA0A0J9YX94 578 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 TRIM13O60858 407 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 TPP2P29144 1249 aaPredicted RBP5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 NR0B2Q15466 257 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 ENOX2Q16206 610 aaKnown RBP5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 TIGD5Q53EQ6 642 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 ZNF385BQ569K4 471 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 CXorf38Q8TB03 319 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 INTS4Q96HW7 963 aaKnown RBP5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 Q96M66 194 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 CWC22Q9HCG8 908 aaKnown RBP5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 KCTD3Q9Y597 815 aa5.31□□□□□ -1.56
CLNS1A-209ENST00000527299 FITM1A5D6W6 292 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 CELA3AP09093 270 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 GRK4P32298 578 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 CDK8P49336 464 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 SKOR2Q2VWA4 1001 aaPredicted RBP5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 WIPI1Q5MNZ9 446 aaPredicted RBP5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 OXR1Q8N573 874 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 OSBPL7Q9BZF2 842 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 XYLT2Q9H1B5 865 aa5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 TRIT1Q9H3H1 467 aaKnown RBP5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 YBX2Q9Y2T7 364 aaKnown RBP5.3□□□□□ -1.56
CLNS1A-209ENST00000527299 TMEM132EQ6IEE7 984 aa5.29□□□□□ -1.56
CLNS1A-209ENST00000527299 TMEM151BQ8IW70 566 aa5.29□□□□□ -1.56
CLNS1A-209ENST00000527299 SGPP1Q9BX95 441 aa5.29□□□□□ -1.56
CLNS1A-209ENST00000527299 RFXAPO00287 272 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 PDIA4P13667 645 aaKnown RBP5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 ETV3P41162 512 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 NFKB2Q00653 900 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 PLCB3Q01970 1234 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 EGR3Q06889 387 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 SSPNQ14714 243 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 GGNQ86UU5 652 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 GPR62Q9BZJ7 368 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 TACC3Q9Y6A5 838 aa5.28□□□□□ -1.56
CLNS1A-209ENST00000527299 GFRA2O00451 464 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 TREHO43280 583 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 TRIM26Q12899 539 aaPredicted RBP5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 SNX17Q15036 470 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 PRRT2Q7Z6L0 340 aaPredicted RBP5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 TSPYL5Q86VY4 417 aaPredicted RBP5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 FBF1Q8TES7 1133 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 DHX38Q92620 1227 aaKnown RBP5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 SHISA4Q96DD7 197 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 GPATCH2Q9NW75 528 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
CLNS1A-209ENST00000527299 OTOL1A6NHN0 477 aaPredicted RBP5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 GIPC1O14908 333 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 PDE6BP35913 854 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 PDE4CQ08493 712 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 SLC6A19Q695T7 634 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 SPPL2CQ8IUH8 684 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 DNAJB8Q8NHS0 232 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 DPH2Q9BQC3 489 aaPredicted RBP5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 DCTN4Q9UJW0 460 aa5.26□□□□□ -1.57
CLNS1A-209ENST00000527299 SASH1O94885 1247 aa5.25□□□□□ -1.57
CLNS1A-209ENST00000527299 CHRNEQ04844 493 aa5.25□□□□□ -1.57
CLNS1A-209ENST00000527299 SV2BQ7L1I2 683 aa5.25□□□□□ -1.57
CLNS1A-209ENST00000527299 TMEM87BQ96K49 555 aa5.25□□□□□ -1.57
CLNS1A-209ENST00000527299 CEP131Q9UPN4 1083 aa5.25□□□□□ -1.57
CLNS1A-209ENST00000527299 SOWAHDA6NJG2 315 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms