RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 APPP05067 770 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 OSBPP22059 807 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 GUCY1A2P33402 732 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 PRMT2P55345 433 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 IRX3P78415 501 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 SEPT2Q15019 361 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 FAM110CQ1W6H9 321 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 SEC62Q99442 399 aaKnown RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 ASCC2Q9H1I8 757 aaPredicted RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
SYVN1-208ENST00000527142 BAZ2AQ9UIF9 1905 aaKnown RBP12.86□□□□□ -0.35
SYVN1-208ENST00000527142 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 AKR1B1P15121 316 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 ICA1Q05084 483 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 NAPBQ9H115 298 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
SYVN1-208ENST00000527142 CENPFP49454 3210 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 HIP1O00291 1037 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 SLC3A2P08195 630 aaKnown RBP12.84□□□□□ -0.35
SYVN1-208ENST00000527142 VCAM1P19320 739 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 PSMC4P43686 418 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 MFAP1P55081 439 aaKnown RBP12.84□□□□□ -0.35
SYVN1-208ENST00000527142 FCGRTP55899 365 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 CAP1Q01518 475 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 ACER1Q8TDN7 264 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 LPAR1Q92633 364 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 ARHGAP39Q9C0H5 1083 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
SYVN1-208ENST00000527142 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 FOXP2O15409 715 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 RASA1P20936 1047 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 HOXD10P28358 340 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 HERVK_113P62684 666 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
SYVN1-208ENST00000527142 ALX1Q15699 326 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 ARMC5Q96C12 935 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 MKNK2Q9HBH9 465 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
SYVN1-208ENST00000527142 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
SYVN1-208ENST00000527142 PDE4AP27815 886 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 PDE4BQ07343 736 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 PPARAQ07869 468 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 ZYXQ15942 572 aaKnown RBP12.82□□□□□ -0.36
SYVN1-208ENST00000527142 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 DIAPH3Q9NSV4 1193 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 TMX2Q9Y320 296 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 MYH8P13535 1937 aa12.82□□□□□ -0.36
SYVN1-208ENST00000527142 A0A1W2PRG0 241 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 SDSP20132 328 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 CTGFP29279 349 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 LBX2Q6XYB7 198 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 P2RX7Q99572 595 aaKnown RBP12.81□□□□□ -0.36
SYVN1-208ENST00000527142 VCPKMTQ9H867 229 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 ANAPC4Q9UJX5 808 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 PTCH2Q9Y6C5 1203 aa12.81□□□□□ -0.36
SYVN1-208ENST00000527142 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 SLC9C1Q4G0N8 1177 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 SIAH1Q8IUQ4 282 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
SYVN1-208ENST00000527142 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
SYVN1-208ENST00000527142 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms