RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 BRMS1Q9HCU9 246 aa6.56□□□□□ -1.36
CTR9-203ENST00000526874 DDX56Q9NY93 547 aaKnown RBP6.56□□□□□ -1.36
CTR9-203ENST00000526874 TGFB1P01137 390 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 FAM87AP0C7U9 286 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 PLCG1P19174 1290 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 APOBRQ0VD83 1088 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 HSP90AB4PQ58FF6 505 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 ZNF765Q7L2R6 523 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 ZAR1Q86SH2 424 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 CCDC84Q86UT8 332 aaPredicted RBP6.55□□□□□ -1.36
CTR9-203ENST00000526874 ZNF507Q8TCN5 953 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 KCNQ5Q9NR82 932 aa6.55□□□□□ -1.36
CTR9-203ENST00000526874 A0A0U1RQG5 324 aaPredicted RBP6.54□□□□□ -1.36
CTR9-203ENST00000526874 UPK3BL1B0FP48 263 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 UPK3BL2E5RIL1 263 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 ENPP3O14638 875 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 MCM4P33991 863 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 PAK2Q13177 524 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 SLBPQ14493 270 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTR9-203ENST00000526874 GK5Q6ZS86 529 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 CCDC146Q8IYE0 955 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 ACSF2Q96CM8 615 aaPredicted RBP6.54□□□□□ -1.36
CTR9-203ENST00000526874 SGSM3Q96HU1 749 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 TJP2Q9UDY2 1190 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 KLHL3Q9UH77 587 aa6.54□□□□□ -1.36
CTR9-203ENST00000526874 CREB3O43889 395 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 DNAJA2O60884 412 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 DNAJC6O75061 913 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 PPFIA4O75335 1185 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 S100BP04271 92 aaPredicted RBP6.53□□□□□ -1.36
CTR9-203ENST00000526874 SERINC3Q13530 473 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 RALBP1Q15311 655 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
CTR9-203ENST00000526874 PRAMEF13Q5VWM6 474 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 SPTY2D1Q68D10 685 aaPredicted RBP6.53□□□□□ -1.36
CTR9-203ENST00000526874 ZNF654Q8IZM8 581 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 NKD1Q969G9 470 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 MRFAP1L1Q96HT8 127 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
CTR9-203ENST00000526874 OSBPL1AQ9BXW6 950 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 LRRC4CQ9HCJ2 640 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 REV1Q9UBZ9 1251 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 PCDHB14Q9Y5E9 798 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 U3KQE9 123 aa6.53□□□□□ -1.36
CTR9-203ENST00000526874 GSC2O15499 205 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 HTR3BO95264 441 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 TBX4P57082 545 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 AMPD3Q01432 767 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 CLCQ05315 142 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 PDE4BQ07343 736 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 DIEXFQ68CQ4 756 aaKnown RBP6.52□□□□□ -1.37
CTR9-203ENST00000526874 HID1Q8IV36 788 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 PSMG3-AS1Q96PY0 264 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 MIPEPQ99797 713 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 SPC25Q9HBM1 224 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
CTR9-203ENST00000526874 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
CTR9-203ENST00000526874 FAM50AQ14320 339 aaKnown RBP6.51□□□□□ -1.37
CTR9-203ENST00000526874 FAM181AQ8N9Y4 354 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 KCT2Q8NC54 265 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 FAM13CQ8NE31 585 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 RIN3Q8TB24 985 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTR9-203ENST00000526874 LRRC3Q9BY71 257 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 FOXQ1Q9C009 403 aa6.51□□□□□ -1.37
CTR9-203ENST00000526874 CHURC1-FNTBB4DL54 471 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 EIF3JO75822 258 aaKnown RBP6.5□□□□□ -1.37
CTR9-203ENST00000526874 LRIG2O94898 1065 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 SLITRK5O94991 958 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 RHBDL3P58872 404 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 CCDC81Q6ZN84 652 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 JDP2Q8WYK2 163 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 ANTXR1Q9H6X2 564 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 PRDM10Q9NQV6 1147 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 TERF2IPQ9NYB0 399 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 CNTNAP4Q9C0A0 1308 aa6.5□□□□□ -1.37
CTR9-203ENST00000526874 ROBO2Q9HCK4 1378 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 ATF4P18848 351 aaPredicted RBP6.49□□□□□ -1.37
CTR9-203ENST00000526874 SSTR4P31391 388 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 LEMD3Q9Y2U8 911 aa6.49□□□□□ -1.37
CTR9-203ENST00000526874 MAFGO15525 162 aa6.48□□□□□ -1.37
CTR9-203ENST00000526874 MED26O95402 600 aa6.48□□□□□ -1.37
CTR9-203ENST00000526874 EOMESO95936 686 aa6.48□□□□□ -1.37
CTR9-203ENST00000526874 CST3P01034 146 aaPredicted RBP6.48□□□□□ -1.37
CTR9-203ENST00000526874 PDGFRBP09619 1106 aa6.48□□□□□ -1.37
CTR9-203ENST00000526874 PAX3P23760 479 aa6.48□□□□□ -1.37
CTR9-203ENST00000526874 GJA8P48165 433 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms