RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 GREB1LQ9C091 1923 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-204ENST00000526468 SYN1P17600 705 aa14.28□□□□□ -0.12
CAPN1-204ENST00000526468 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
CAPN1-204ENST00000526468 WDR78Q5VTH9 848 aa14.28□□□□□ -0.12
CAPN1-204ENST00000526468 GPR142Q7Z601 462 aa14.28□□□□□ -0.12
CAPN1-204ENST00000526468 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
CAPN1-204ENST00000526468 PFASO15067 1338 aa14.27□□□□□ -0.12
CAPN1-204ENST00000526468 IGSF3O75054 1194 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 RLBP1P12271 317 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 XRCC5P13010 732 aaKnown RBP14.27□□□□□ -0.13
CAPN1-204ENST00000526468 HNRNPUQ00839 825 aaKnown RBP eCLIP14.27□□□□□ -0.13
CAPN1-204ENST00000526468 CCL14Q16627 93 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 MAP3K21Q5TCX8 1036 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 AACSQ86V21 672 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.13
CAPN1-204ENST00000526468 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-204ENST00000526468 EMILIN3Q9NT22 766 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 RBPJLQ9UBG7 517 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 SERPINB13Q9UIV8 391 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 OGDHLQ9ULD0 1010 aa14.27□□□□□ -0.13
CAPN1-204ENST00000526468 VCAM1P19320 739 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-204ENST00000526468 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-204ENST00000526468 CCNA1P78396 465 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 MAP3K12Q12852 859 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 EHD4Q9H223 541 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 EXOC6BQ9Y2D4 811 aa14.26□□□□□ -0.13
CAPN1-204ENST00000526468 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L15C9J2P7 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L13C9JLJ4 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L11C9JVI0 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L18D6R9N7 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L22D6RA61 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L17D6RBQ6 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L19D6RCP7 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L20D6RJB6 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP14P54578 494 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-204ENST00000526468 USP17L24Q0WX57 530 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 ABCB5Q2M3G0 1257 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 CEP85Q6P2H3 762 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 DNAH12Q6ZR08 3092 aa14.25□□□□□ -0.13
CAPN1-204ENST00000526468 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
CAPN1-204ENST00000526468 MAP2K5Q13163 448 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 Q3C1V9 767 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 CERKLQ49MI3 558 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-204ENST00000526468 MORN1Q5T089 497 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 TATDN1Q6P1N9 297 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 GDF15Q99988 308 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 CABP5Q9NP86 173 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 IVNS1ABPQ9Y6Y0 642 aa14.24□□□□□ -0.13
CAPN1-204ENST00000526468 MYO9BQ13459 2157 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 CNMDO75829 334 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 SHMT1P34896 483 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 ACER1Q8TDN7 264 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 USP6NLQ92738 828 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
CAPN1-204ENST00000526468 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 RPAP3Q9H6T3 665 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-204ENST00000526468 IL1RAPL2Q9NP60 686 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 RABGAP1Q9Y3P9 1069 aa14.23□□□□□ -0.13
CAPN1-204ENST00000526468 SPDYE16A6NNV3 312 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-204ENST00000526468 APBB1O00213 710 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 MPHOSPH10O00566 681 aaKnown RBP14.22□□□□□ -0.13
CAPN1-204ENST00000526468 POLR3DP05423 398 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-204ENST00000526468 BMP8BP34820 402 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 MFSD14CQ5VZR4 134 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 POTEEQ6S8J3 1075 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 TDHQ8IZJ6 230 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
CAPN1-204ENST00000526468 CRNKL1Q9BZJ0 848 aaKnown RBP14.22□□□□□ -0.13
CAPN1-204ENST00000526468 TANGO6Q9C0B7 1094 aa14.22□□□□□ -0.13
CAPN1-204ENST00000526468 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 COL6A1P12109 1028 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 PDE6AP16499 860 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 PLCD1P51178 756 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 SEPT2Q15019 361 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 TTF1Q15361 905 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-204ENST00000526468 LRRC26Q2I0M4 334 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 TMED8Q6PL24 325 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-204ENST00000526468 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 RIOK1Q9BRS2 568 aaKnown RBP14.21□□□□□ -0.13
CAPN1-204ENST00000526468 MCM9Q9NXL9 1143 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 FLRT1Q9NZU1 646 aa14.21□□□□□ -0.13
CAPN1-204ENST00000526468 CNGA1P29973 690 aa14.2□□□□□ -0.14
CAPN1-204ENST00000526468 GRB14Q14449 540 aa14.2□□□□□ -0.14
CAPN1-204ENST00000526468 LHX8Q68G74 356 aa14.2□□□□□ -0.14
CAPN1-204ENST00000526468 SLC17A8Q8NDX2 589 aa14.2□□□□□ -0.14
CAPN1-204ENST00000526468 EDC3Q96F86 508 aaKnown RBP14.2□□□□□ -0.14
CAPN1-204ENST00000526468 BTBD7Q9P203 1132 aa14.2□□□□□ -0.14
CAPN1-204ENST00000526468 ZNF532Q9HCE3 1301 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms