RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 MAP2K5Q13163 448 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 POLA2Q14181 598 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 CERKLQ49MI3 558 aaPredicted RBP8.03□□□□□ -1.12
CD44-221ENST00000526000 GJC2Q5T442 439 aaPredicted RBP8.03□□□□□ -1.12
CD44-221ENST00000526000 MAP3K21Q5TCX8 1036 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 MFSD14CQ5VZR4 134 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 CATSPERGQ6ZRH7 1159 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 TDHQ8IZJ6 230 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 SOCS4Q8WXH5 440 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 CABP5Q9NP86 173 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 BTBD7Q9P203 1132 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
CD44-221ENST00000526000 CYP2D6P10635 497 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 XRCC5P13010 732 aaKnown RBP8.02□□□□□ -1.13
CD44-221ENST00000526000 CAPN2P17655 700 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 PTPREP23469 700 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 PLS1Q14651 629 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 SEPT2Q15019 361 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 ABCB5Q2M3G0 1257 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 SLFNL1Q499Z3 407 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 ZKSCAN2Q63HK3 967 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 DPP9Q86TI2 863 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 ITPRIPQ8IWB1 547 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 TRPV1Q8NER1 839 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 FERMT2Q96AC1 680 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 LBHD1Q9BQE6 289 aaPredicted RBP8.02□□□□□ -1.13
CD44-221ENST00000526000 RPAP3Q9H6T3 665 aaPredicted RBP8.02□□□□□ -1.13
CD44-221ENST00000526000 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 GPR108Q9NPR9 543 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 EXOC6BQ9Y2D4 811 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 ATP11BQ9Y2G3 1177 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 RABGAP1Q9Y3P9 1069 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 BRCA2P51587 3418 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 MGAMO43451 1857 aa8.02□□□□□ -1.13
CD44-221ENST00000526000 SLC15A5A6NIM6 579 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
CD44-221ENST00000526000 COL6A1P12109 1028 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 RLBP1P12271 317 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 VCAM1P19320 739 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 GUCY1A2P33402 732 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 CCNA1P78396 465 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 LRIT3Q3SXY7 679 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 AACSQ86V21 672 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 METTL16Q86W50 562 aaKnown RBP8.01□□□□□ -1.13
CD44-221ENST00000526000 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
CD44-221ENST00000526000 SLC44A5Q8NCS7 719 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 SSH3Q8TE77 659 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 DYNLL2Q96FJ2 89 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 APBA2Q99767 749 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 PRDM5Q9NQX1 630 aaPredicted RBP8.01□□□□□ -1.13
CD44-221ENST00000526000 SERPINB13Q9UIV8 391 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 IVNS1ABPQ9Y6Y0 642 aa8.01□□□□□ -1.13
CD44-221ENST00000526000 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
CD44-221ENST00000526000 A0A1W2PRG0 241 aa8□□□□□ -1.13
CD44-221ENST00000526000 SMIM22K7EJ46 135 aa8□□□□□ -1.13
CD44-221ENST00000526000 SHMT1P34896 483 aa8□□□□□ -1.13
CD44-221ENST00000526000 RTP1P59025 263 aa8□□□□□ -1.13
CD44-221ENST00000526000 MAP3K12Q12852 859 aa8□□□□□ -1.13
CD44-221ENST00000526000 KIAA1755Q5JYT7 1200 aa8□□□□□ -1.13
CD44-221ENST00000526000 TATDN1Q6P1N9 297 aa8□□□□□ -1.13
CD44-221ENST00000526000 CLEC10AQ8IUN9 316 aa8□□□□□ -1.13
CD44-221ENST00000526000 SPICE1Q8N0Z3 855 aa8□□□□□ -1.13
CD44-221ENST00000526000 STK11IPQ8N1F8 1099 aa8□□□□□ -1.13
CD44-221ENST00000526000 MOV10L1Q9BXT6 1211 aaKnown RBP8□□□□□ -1.13
CD44-221ENST00000526000 TANGO6Q9C0B7 1094 aa8□□□□□ -1.13
CD44-221ENST00000526000 GINM1Q9NU53 330 aa8□□□□□ -1.13
CD44-221ENST00000526000 MCM9Q9NXL9 1143 aa8□□□□□ -1.13
CD44-221ENST00000526000 PRKAG2Q9UGJ0 569 aa8□□□□□ -1.13
CD44-221ENST00000526000 DDX20Q9UHI6 824 aaKnown RBP8□□□□□ -1.13
CD44-221ENST00000526000 STXBP5LQ9Y2K9 1186 aa8□□□□□ -1.13
CD44-221ENST00000526000 DOCK2Q92608 1830 aa8□□□□□ -1.13
CD44-221ENST00000526000 DOCK1Q14185 1865 aa8□□□□□ -1.13
CD44-221ENST00000526000 PHIPQ8WWQ0 1821 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 CYP2D7A0A087X1C5 515 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
CD44-221ENST00000526000 PRKAB2O43741 272 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 RAD21O60216 631 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 COBLO75128 1261 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 ERCC3P19447 782 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 ADORA2AP29274 412 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 ADCYAP1R1P41586 468 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 SLC4A3P48751 1232 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 USP14P54578 494 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 COG2Q14746 738 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 SHHQ15465 462 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 C9orf50Q5SZB4 431 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 NCAPG2Q86XI2 1143 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
CD44-221ENST00000526000 PANK1Q8TE04 598 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 GTF3C2Q8WUA4 911 aaPredicted RBP7.99□□□□□ -1.13
CD44-221ENST00000526000 SDR42E1Q8WUS8 393 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 BADQ92934 168 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 C12orf42Q96LP6 360 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 GUCD1Q96NT3 240 aa7.99□□□□□ -1.13
CD44-221ENST00000526000 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
CD44-221ENST00000526000 COL25A1Q9BXS0 654 aaPredicted RBP7.99□□□□□ -1.13
CD44-221ENST00000526000 KIAA1683Q9H0B3 1180 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms