RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 C12orf42Q96LP6 360 aa10.01□□□□□ -0.81
GRAMD1B-205ENST00000525945 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
GRAMD1B-205ENST00000525945 AATFQ9NY61 560 aaKnown RBP eCLIP10.01□□□□□ -0.81
GRAMD1B-205ENST00000525945 FLT1P17948 1338 aa10.01□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L15C9J2P7 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L13C9JLJ4 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L11C9JVI0 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L18D6R9N7 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L22D6RA61 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L17D6RBQ6 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L19D6RCP7 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L20D6RJB6 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 GDF11O95390 407 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 HOXC6P09630 235 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 PTPREP23469 700 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 MCAMP43121 646 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 ATN1P54259 1190 aaPredicted RBP10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP14P54578 494 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 PPP4CP60510 307 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 ATP2B2Q01814 1243 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 SLFN5Q08AF3 891 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 USP17L24Q0WX57 530 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 MTX1Q13505 466 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 WDR78Q5VTH9 848 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 MAPKAPK5Q8IW41 473 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 ARRDC4Q8NCT1 418 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
GRAMD1B-205ENST00000525945 TGFBRAP1Q8WUH2 860 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
GRAMD1B-205ENST00000525945 CDX2Q99626 313 aaPredicted RBP10□□□□□ -0.81
GRAMD1B-205ENST00000525945 MEIS3Q99687 375 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 FEZ1Q99689 392 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
GRAMD1B-205ENST00000525945 NOB1Q9ULX3 412 aaKnown RBP10□□□□□ -0.81
GRAMD1B-205ENST00000525945 POTEMA6NI47 508 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 KBTBD13C9JR72 458 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 PITPNM1O00562 1244 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 RTP1P59025 263 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 JAG1P78504 1218 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 SMAD3P84022 425 aaKnown RBP9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 GRB14Q14449 540 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 LBX2Q6XYB7 198 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 SEMA6BQ9H3T3 888 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 PRDM6Q9NQX0 595 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 PALD1Q9ULE6 856 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 ATP11BQ9Y2G3 1177 aa9.99□□□□□ -0.81
GRAMD1B-205ENST00000525945 CDK5RAP2Q96SN8 1893 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 TMEM265A0A087WTH1 108 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 CNMDO75829 334 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 SHHQ15465 462 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 ZYXQ15942 572 aaKnown RBP9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 CCDC158Q5M9N0 1113 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 TTC39AQ5SRH9 613 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 SLC39A5Q6ZMH5 540 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 CATSPERGQ6ZRH7 1159 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 FLRT1Q9NZU1 646 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 ZNF236Q9UL36 1845 aa9.98□□□□□ -0.81
GRAMD1B-205ENST00000525945 STRNO43815 780 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 GH2P01242 217 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 CYBAP13498 195 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 FOSL2P15408 326 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 VCAM1P19320 739 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 CYP2C19P33261 490 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 SHROOM1Q2M3G4 852 aaPredicted RBP9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 OLFML2BQ68BL8 750 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 POTEEQ6S8J3 1075 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 NPLOC4Q8TAT6 608 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 KIAA1683Q9H0B3 1180 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 PRDM5Q9NQX1 630 aaPredicted RBP9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 SLC5A4Q9NY91 659 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 SAP30BPQ9UHR5 308 aaKnown RBP9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.97□□□□□ -0.81
GRAMD1B-205ENST00000525945 EYSQ5T1H1 3165 aa9.96□□□□□ -0.81
GRAMD1B-205ENST00000525945 RLFQ13129 1914 aa9.96□□□□□ -0.81
GRAMD1B-205ENST00000525945 SEPT4O43236 478 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 SNX17Q15036 470 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 C9orf50Q5SZB4 431 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 GJC2Q5T442 439 aaPredicted RBP9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 C1orf53Q5VUE5 145 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 ADGRA1Q86SQ6 560 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 MYLIPQ8WY64 445 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 ARHGAP45Q92619 1136 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 BADQ92934 168 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 EHD4Q9H223 541 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 CABP5Q9NP86 173 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 GPR108Q9NPR9 543 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 SERPINB13Q9UIV8 391 aa9.96□□□□□ -0.82
GRAMD1B-205ENST00000525945 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 IGHA2P01877 340 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 GNAI2P04899 355 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 CYP2E1P05181 493 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 ADORA2AP29274 412 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 USP5P45974 858 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms