RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 GAB4Q2WGN9 574 aa7.86□□□□□ -1.15
CSDE1-210ENST00000525878 CCDC84Q86UT8 332 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-210ENST00000525878 CEP131Q9UPN4 1083 aa7.86□□□□□ -1.15
CSDE1-210ENST00000525878 TLR6Q9Y2C9 796 aa7.86□□□□□ -1.15
CSDE1-210ENST00000525878 DNAJC25-GNG10A0A024R161 153 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 TAF1CQ15572 869 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-210ENST00000525878 RALGPS1Q5JS13 557 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 MPZL3Q6UWV2 235 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 TTC6Q86TZ1 520 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 PHC3Q8NDX5 983 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 SLAMF8Q9P0V8 285 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 PARP2Q9UGN5 583 aa7.85□□□□□ -1.15
CSDE1-210ENST00000525878 USP31Q70CQ4 1352 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 WASH4PA8MWX3 477 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 CTSHP09668 335 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 CFPP27918 469 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 TMEM201Q5SNT2 666 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 SYDE1Q6ZW31 735 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-210ENST00000525878 KRTAP4-9Q9BYQ8 210 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 GPR62Q9BZJ7 368 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 TMEM59LQ9UK28 342 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 CORINQ9Y5Q5 1042 aa7.84□□□□□ -1.15
CSDE1-210ENST00000525878 FAM221AA4D161 298 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 CILPO75339 1184 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 HPXP02790 462 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 SND1Q7KZF4 910 aaKnown RBP eCLIP7.83□□□□□ -1.16
CSDE1-210ENST00000525878 FBXO15Q8NCQ5 510 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-210ENST00000525878 ABHD4Q8TB40 342 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 CYB5D2Q8WUJ1 264 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 TOX2Q96NM4 488 aa7.83□□□□□ -1.16
CSDE1-210ENST00000525878 ERVFC1P60507 584 aa7.82□□□□□ -1.16
CSDE1-210ENST00000525878 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
CSDE1-210ENST00000525878 JARID2Q92833 1246 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-210ENST00000525878 SP110Q9HB58 689 aa7.82□□□□□ -1.16
CSDE1-210ENST00000525878 PRR36Q9H6K5 1346 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 C1QTNF9P0C862 333 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 RAC2P15153 192 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 TPP2P29144 1249 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-210ENST00000525878 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-210ENST00000525878 CREG2Q8IUH2 290 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 DTWD2Q8NBA8 298 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 ADAMTS10Q9H324 1103 aa7.81□□□□□ -1.16
CSDE1-210ENST00000525878 TRIT1Q9H3H1 467 aaKnown RBP7.81□□□□□ -1.16
CSDE1-210ENST00000525878 NSUN3Q9H649 340 aaKnown RBP7.81□□□□□ -1.16
CSDE1-210ENST00000525878 UPK3BL1B0FP48 263 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 UPK3BL2E5RIL1 263 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 LMNB2Q03252 620 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 PSMD2Q13200 908 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 BNC2Q6ZN30 1099 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-210ENST00000525878 LCNL1Q6ZST4 164 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 TSPYL5Q86VY4 417 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-210ENST00000525878 SLFN12Q8IYM2 578 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 MYLIPQ8WY64 445 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 RHOVQ96L33 236 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 DIRC2Q96SL1 478 aa7.8□□□□□ -1.16
CSDE1-210ENST00000525878 PLCG1P19174 1290 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 HK2P52789 917 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 CAMK2GQ13555 558 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-210ENST00000525878 ANKLE2Q86XL3 938 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 SIAH1Q8IUQ4 282 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-210ENST00000525878 RNF141Q8WVD5 230 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 GATAD2BQ8WXI9 593 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 GPATCH2Q9NW75 528 aa7.79□□□□□ -1.16
CSDE1-210ENST00000525878 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
CSDE1-210ENST00000525878 FBXO33Q7Z6M2 555 aa7.78□□□□□ -1.16
CSDE1-210ENST00000525878 FAM13CQ8NE31 585 aa7.78□□□□□ -1.16
CSDE1-210ENST00000525878 ZSCAN18Q8TBC5 510 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-210ENST00000525878 KRTAP9-7A8MTY7 169 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 NFIBO00712 420 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 F13A1P00488 732 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 PF4P02776 101 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 ZGLP1P0C6A0 271 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
CSDE1-210ENST00000525878 CRELD1Q96HD1 420 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 EPB41L4BQ9H329 900 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 KCNK12Q9HB15 430 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 CD320Q9NPF0 282 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 DCP1AQ9NPI6 582 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-210ENST00000525878 DUSP13Q9UII6 198 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 KCNH3Q9ULD8 1083 aa7.77□□□□□ -1.17
CSDE1-210ENST00000525878 LRRN2O75325 713 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 EGR3Q06889 387 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 NR0B2Q15466 257 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 PDZD8Q8NEN9 1154 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 FAM161BQ96MY7 647 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 RSRP1Q9BUV0 290 aa7.76□□□□□ -1.17
CSDE1-210ENST00000525878 POLR3KQ9Y2Y1 108 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-210ENST00000525878 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
CSDE1-210ENST00000525878 BPNT1O95861 308 aa7.75□□□□□ -1.17
CSDE1-210ENST00000525878 GLDCP23378 1020 aa7.75□□□□□ -1.17
CSDE1-210ENST00000525878 TRHRP34981 398 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-210ENST00000525878 XPCQ01831 940 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-210ENST00000525878 DIEXFQ68CQ4 756 aaKnown RBP7.75□□□□□ -1.17
CSDE1-210ENST00000525878 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
CSDE1-210ENST00000525878 TMEM74Q96NL1 305 aa7.75□□□□□ -1.17
CSDE1-210ENST00000525878 PCDHA11Q9Y5I1 949 aa7.75□□□□□ -1.17
CSDE1-210ENST00000525878 F6X3S4 739 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 TMEM253P0C7T8 217 aa7.74□□□□□ -1.17
CSDE1-210ENST00000525878 LILRA2Q8N149 483 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms