RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 IL15P40933 162 aaPredicted RBP7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 CRKP46108 304 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 RGS19P49795 217 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 INHBEP58166 350 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 FKBP1CQ5VVH2 108 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 APOBEC3HQ6NTF7 200 aaKnown RBP7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 ZDHHC15Q96MV8 337 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 TEPSINQ96N21 525 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 ZNF70Q9UC06 446 aaPredicted RBP7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 SCN9AQ15858 1988 aa7.42□□□□□ -1.22
CCDC90B-204ENST00000525504 CLRN2A0PK11 232 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 GNAI3P08754 354 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 FURINP09958 794 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 NBPF12Q5TAG4 269 aaPredicted RBP7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 DESI1Q6ICB0 168 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 HHIPL2Q6UWX4 724 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 WDR66Q8TBY9 1149 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 FOXJ1Q92949 421 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 MEIS3Q99687 375 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 MCOLN1Q9GZU1 580 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 CEP126Q9P2H0 1117 aa7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 ANGEL1Q9UNK9 670 aaKnown RBP7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 LRRFIP2Q9Y608 721 aaKnown RBP7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 COL1A1P02452 1464 aaPredicted RBP7.41□□□□□ -1.22
CCDC90B-204ENST00000525504 BCAR3O75815 825 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 ZBTB48P10074 688 aaPredicted RBP7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 SLC5A1P13866 664 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TRIM27P14373 513 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 RBM5P52756 815 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TNFAIP1Q13829 316 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TTLL12Q14166 644 aaPredicted RBP7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TPRNQ4KMQ1 711 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 ATF7IPQ6VMQ6 1270 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 SH3RF1Q7Z6J0 888 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 FAM83AQ86UY5 434 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TEKT1Q969V4 418 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 TDRD3Q9H7E2 651 aaKnown RBP7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 VEZTQ9HBM0 779 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 IQSEC3Q9UPP2 1182 aaPredicted RBP7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 THSD7BQ9C0I4 1608 aa7.4□□□□□ -1.22
CCDC90B-204ENST00000525504 SALL1Q9NSC2 1324 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 MANSC4A6NHS7 340 aaPredicted RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 GPR25O00155 361 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 SPINT1O43278 529 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 FRAT2O75474 233 aaPredicted RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 FDX1P10109 184 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 GJA5P36382 358 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 IREB2P48200 963 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 SREBF2Q12772 1141 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 PRKG1Q13976 671 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 PKN2Q16513 984 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 ATP2B3Q16720 1220 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 ANKRD13AQ8IZ07 590 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 KRI1Q8N9T8 703 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 CLMNQ96JQ2 1002 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 GNL3LQ9NVN8 582 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 FZD1Q9UP38 647 aa7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 PA2G4Q9UQ80 394 aaKnown RBP7.39□□□□□ -1.23
CCDC90B-204ENST00000525504 MAST3O60307 1309 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 PDS5AQ29RF7 1337 aaKnown RBP7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 SRGAP3O43295 1099 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 TBC1D8O95759 1140 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 GNAI2P04899 355 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 TNNI2P48788 182 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 TIMM10P62072 90 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 DGKZQ13574 1117 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 GAS6Q14393 721 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 DIEXFQ68CQ4 756 aaKnown RBP7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 CCDC102BQ68D86 513 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 PTPN18Q99952 460 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 TMEM39BQ9GZU3 492 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 SIL1Q9H173 461 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 R3HDMLQ9H3Y0 253 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 DENND2AQ9ULE3 1009 aa7.38□□□□□ -1.23
CCDC90B-204ENST00000525504 SSC5DA1L4H1 1573 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 KRBA1A5PL33 1030 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 CCDC85CA6NKD9 419 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 TCP10L2B9ZVM9 353 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 BCRP11274 1271 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 ADORA1P30542 326 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 PHKA1P46020 1223 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 MDM2Q00987 491 aaPredicted RBP7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 ZKSCAN2Q63HK3 967 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 CDC42EP5Q6NZY7 148 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 FAM151AQ8WW52 585 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 ZNF112Q9UJU3 913 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 TNNQ9UQP3 1299 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 AKAP2Q9Y2D5 859 aa7.37□□□□□ -1.23
CCDC90B-204ENST00000525504 DAGLAQ9Y4D2 1042 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms