RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
ATM-206ENST00000525056 USPL1Q5W0Q7 1092 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 PLA2G4DQ86XP0 818 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 CCDC112Q8NEF3 446 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 ANKRD24Q8TF21 1146 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 AIDAQ96BJ3 306 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 ARID3AQ99856 593 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 NOL10Q9BSC4 688 aaKnown RBP7.81□□□□□ -1.16
ATM-206ENST00000525056 CUEDC1Q9NWM3 386 aaPredicted RBP7.81□□□□□ -1.16
ATM-206ENST00000525056 ZMIZ1Q9ULJ6 1067 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 HEG1Q9ULI3 1381 aa7.81□□□□□ -1.16
ATM-206ENST00000525056 NHSQ6T4R5 1651 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 CCDC66A2RUB6 948 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 LGR5O75473 907 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 MSX1P28360 303 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 EIF4A1P60842 406 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 NEXNQ0ZGT2 675 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.16
ATM-206ENST00000525056 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 CREB3L3Q68CJ9 461 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 CWC27Q6UX04 472 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 KSR2Q6VAB6 950 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 CCDC83Q8IWF9 413 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 VWA5B2Q8N398 1253 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 CCDC150Q8NCX0 1101 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 IP6K1Q92551 441 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 IRF7Q92985 503 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 BPIFA3Q9BQP9 254 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 ANO10Q9NW15 660 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 C9orf78Q9NZ63 289 aaPredicted RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 PRDM4Q9UKN5 801 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 RBM8AQ9Y5S9 174 aaKnown RBP7.8□□□□□ -1.16
ATM-206ENST00000525056 SHANK3Q9BYB0 1731 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 ITGB4P16144 1822 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 CHD4Q14839 1912 aa7.8□□□□□ -1.16
ATM-206ENST00000525056 DOT1LQ8TEK3 1739 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 C21orf2O43822 256 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 TPM1P09493 284 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 VSIG8P0DPA2 414 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 IL2RBP14784 551 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 NOS2P35228 1153 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 ZNF165P49910 485 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 ZNF75DP51815 510 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 TUBB4BP68371 445 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 DBN1Q16643 649 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 LCE2CQ5TA81 110 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 CCDC73Q6ZRK6 1079 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 DRC7Q8IY82 874 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 TRIM22Q8IYM9 498 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 CEP57L1Q8IYX8 460 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 FBXL16Q8N461 479 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 IL17REQ8NFR9 667 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 STK32AQ8WU08 396 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 LEO1Q8WVC0 666 aaPredicted RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 SCG3Q8WXD2 468 aaKnown RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 SRRTQ9BXP5 876 aaKnown RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 TTC12Q9H892 705 aaPredicted RBP7.79□□□□□ -1.16
ATM-206ENST00000525056 IL1RAPL2Q9NP60 686 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 MRVI1Q9Y6F6 885 aa7.79□□□□□ -1.16
ATM-206ENST00000525056 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 CDC14CA4D256 554 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 H3BQV1 296 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 GRM8O00222 908 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 SLC27A2O14975 620 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 PLSCR1O15162 318 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 DHX16O60231 1041 aaKnown RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 PPP1R12BO60237 982 aaPredicted RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 KINO60870 393 aaKnown RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 ZBTB7AO95365 584 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ZSCAN20P17040 1043 aaPredicted RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 ATP5JP18859 108 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 PSMA6P60900 246 aaKnown RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 TXNRD1Q16881 649 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 C1orf141Q5JVX7 400 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 PRPF40BQ6NWY9 871 aaKnown RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 GIMAP6Q6P9H5 292 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ZNF397Q8NF99 534 aaPredicted RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 BICD2Q8TD16 824 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 GTF3C6Q969F1 213 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ERO1AQ96HE7 468 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 GMCL1Q96IK5 515 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 CLIP2Q9UDT6 1046 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ADCY9O60503 1353 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 ABCC12Q96J65 1359 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 SIPA1L3O60292 1781 aaPredicted RBP7.78□□□□□ -1.16
ATM-206ENST00000525056 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
ATM-206ENST00000525056 PALLDQ8WX93 1383 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms