RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 DGKHQ86XP1 1220 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 TMTC2Q8N394 836 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 KLRG1Q96E93 195 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 ZNF408Q9H9D4 720 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 MTMR4Q9NYA4 1195 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 ZNF112Q9UJU3 913 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 NAP1L2Q9ULW6 460 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 LIMCH1Q9UPQ0 1083 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 DOCK1Q14185 1865 aa18.58■□□□□ 0.56
TSPAN4-213ENST00000524895 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 INPP5BP32019 993 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 JAG1P78504 1218 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 ATP2B2Q01814 1243 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 ICA1Q05084 483 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 RCSD1Q6JBY9 416 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 SGMS1Q86VZ5 419 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
TSPAN4-213ENST00000524895 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 KIF3CO14782 793 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 USP2O75604 605 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 TTLL1O95922 423 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 GUCY1A2P33402 732 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 SYNE3Q6ZMZ3 975 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 SCYL3Q8IZE3 742 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 TPCN1Q9ULQ1 816 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
TSPAN4-213ENST00000524895 PAPPA2Q9BXP8 1791 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 TOP1P11387 765 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 ARMC9Q7Z3E5 817 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 ZKSCAN4Q969J2 545 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 ZSCAN31Q96LW9 406 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 TMEM47Q9BQJ4 181 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 BRPF3Q9ULD4 1205 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 CSADQ9Y600 493 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 OTOFQ9HC10 1997 aa18.55■□□□□ 0.56
TSPAN4-213ENST00000524895 EEF2P13639 858 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 NOVP48745 357 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 EVCP57679 992 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 MAP3K9P80192 1104 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 FMR1Q06787 632 aaKnown RBP eCLIP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 NOL9Q5SY16 702 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 ZNF654Q8IZM8 581 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 PNMA1Q8ND90 353 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 ZNF274Q96GC6 653 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 ARHGEF10LQ9HCE6 1279 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 SH2B1Q9NRF2 756 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 NYAP2Q9P242 653 aa18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-213ENST00000524895 ZBTB43O43298 467 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 ITGBL1O95965 494 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 STK3Q13188 491 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 VGLL4Q14135 290 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 MAP3K11Q16584 847 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 ME3Q16798 604 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 MICU3Q86XE3 530 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 RAB11FIP4Q86YS3 637 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 SMC1BQ8NDV3 1235 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 TMX3Q96JJ7 454 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 MYL10Q9BUA6 226 aa18.53■□□□□ 0.56
TSPAN4-213ENST00000524895 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 DDAH1O94760 285 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 LARGE1O95461 756 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 PDIA3P30101 505 aaKnown RBP18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 FKBP1BP68106 108 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 NUP133Q8WUM0 1156 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 SLKQ9H2G2 1235 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 SH2D4AQ9H788 454 aa18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 GBA2Q9HCG7 927 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-213ENST00000524895 MYH4Q9Y623 1939 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 GOLGA8AA7E2F4 631 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 PFKFB2O60825 505 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 CALM1P0DP23 149 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 CALM2P0DP24 149 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 CALM3P0DP25 149 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 RCAN1P53805 252 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 C2orf69Q8N8R5 385 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
TSPAN4-213ENST00000524895 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms