RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.73■□□□□ 0.75
HIF3A-208ENST00000524533 PORCNQ9H237 461 aa19.73■□□□□ 0.75
HIF3A-208ENST00000524533 CWC22Q9HCG8 908 aaKnown RBP19.73■□□□□ 0.75
HIF3A-208ENST00000524533 CABP5Q9NP86 173 aa19.73■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L15C9J2P7 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L13C9JLJ4 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L11C9JVI0 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L18D6R9N7 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L22D6RA61 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L17D6RBQ6 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L19D6RCP7 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L20D6RJB6 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 GOLIM4O00461 696 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 POLR3DP05423 398 aaPredicted RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 XRCC5P13010 732 aaKnown RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 PRKAR2AP13861 404 aaKnown RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 ZKSCAN1P17029 563 aaPredicted RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 SHMT1P34896 483 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 PLCD1P51178 756 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 USP17L24Q0WX57 530 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 Q3C1V9 767 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 GPR142Q7Z601 462 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 TRMT44Q8IYL2 757 aaKnown RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 KIAA1683Q9H0B3 1180 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 COG6Q9Y2V7 657 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 MYH8P13535 1937 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 ZNF532Q9HCE3 1301 aa19.72■□□□□ 0.75
HIF3A-208ENST00000524533 RANBP2P49792 3224 aaKnown RBP19.72■□□□□ 0.75
HIF3A-208ENST00000524533 VCAM1P19320 739 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 RGS2P41220 211 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 MAP3K21Q5TCX8 1036 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 PLEKHH3Q7Z736 793 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 ACER1Q8TDN7 264 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 ZBTB40Q9NUA8 1239 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 MCM9Q9NXL9 1143 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 RABGAP1Q9Y3P9 1069 aa19.71■□□□□ 0.75
HIF3A-208ENST00000524533 CCNA1P78396 465 aa19.7■□□□□ 0.74
HIF3A-208ENST00000524533 SIRT2Q8IXJ6 389 aa19.7■□□□□ 0.74
HIF3A-208ENST00000524533 USP6NLQ92738 828 aa19.7■□□□□ 0.74
HIF3A-208ENST00000524533 APBA2Q99767 749 aa19.7■□□□□ 0.74
HIF3A-208ENST00000524533 PRO3102Q9H379 93 aa19.7■□□□□ 0.74
HIF3A-208ENST00000524533 MYH7P12883 1935 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 TCRBV5S4A2TA0A5A2 114 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 RAB11FIP3O75154 756 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 GABPAQ06546 454 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 MORN1Q5T089 497 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 CATSPERGQ6ZRH7 1159 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 LCORLQ8N3X6 602 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 SDR42E1Q8WUS8 393 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 NBPF3Q9H094 633 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 FRMPD3Q5JV73 1810 aa19.69■□□□□ 0.74
HIF3A-208ENST00000524533 MPHOSPH10O00566 681 aaKnown RBP19.68■□□□□ 0.74
HIF3A-208ENST00000524533 CNMDO75829 334 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
HIF3A-208ENST00000524533 GUCY1A2P33402 732 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 SEPT2Q15019 361 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 WDR78Q5VTH9 848 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 EDC3Q96F86 508 aaKnown RBP19.68■□□□□ 0.74
HIF3A-208ENST00000524533 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
HIF3A-208ENST00000524533 RPAP3Q9H6T3 665 aaPredicted RBP19.68■□□□□ 0.74
HIF3A-208ENST00000524533 PAG1Q9NWQ8 432 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 OGDHLQ9ULD0 1010 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
HIF3A-208ENST00000524533 EVX2Q03828 476 aa19.67■□□□□ 0.74
HIF3A-208ENST00000524533 CACNB2Q08289 660 aaPredicted RBP19.67■□□□□ 0.74
HIF3A-208ENST00000524533 CCL14Q16627 93 aa19.67■□□□□ 0.74
HIF3A-208ENST00000524533 LBX2Q6XYB7 198 aa19.67■□□□□ 0.74
HIF3A-208ENST00000524533 C7orf61Q8IZ16 206 aa19.67■□□□□ 0.74
HIF3A-208ENST00000524533 C11orf49Q9H6J7 331 aa19.67■□□□□ 0.74
HIF3A-208ENST00000524533 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
HIF3A-208ENST00000524533 BAZ2AQ9UIF9 1905 aaKnown RBP19.66■□□□□ 0.74
HIF3A-208ENST00000524533 A0A1W2PPC1 479 aa19.66■□□□□ 0.74
HIF3A-208ENST00000524533 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
HIF3A-208ENST00000524533 MNX1P50219 401 aaPredicted RBP19.66■□□□□ 0.74
HIF3A-208ENST00000524533 MAP2K5Q13163 448 aa19.66■□□□□ 0.74
HIF3A-208ENST00000524533 ARMT1Q9H993 441 aa19.66■□□□□ 0.74
HIF3A-208ENST00000524533 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 MBD4O95243 580 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 CYP2D6P10635 497 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 CCND3P30281 292 aaPredicted RBP19.65■□□□□ 0.74
HIF3A-208ENST00000524533 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.74
HIF3A-208ENST00000524533 BOLA2Q9H3K6 86 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 BTBD7Q9P203 1132 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 SWAP70Q9UH65 585 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 IVNS1ABPQ9Y6Y0 642 aa19.65■□□□□ 0.74
HIF3A-208ENST00000524533 SLC15A5A6NIM6 579 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 ATP5JP18859 108 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 ADD2P35612 726 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 TMEM179Q6ZVK1 233 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 SLC44A5Q8NCS7 719 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 TANGO6Q9C0B7 1094 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 STAP2Q9UGK3 403 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 SZT2Q5T011 3432 aa19.64■□□□□ 0.73
HIF3A-208ENST00000524533 A0A1W2PRG0 241 aa19.63■□□□□ 0.73
HIF3A-208ENST00000524533 PTPREP23469 700 aa19.63■□□□□ 0.73
HIF3A-208ENST00000524533 HAUS7Q99871 368 aa19.63■□□□□ 0.73
HIF3A-208ENST00000524533 ATP8A2Q9NTI2 1148 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms