RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 SDSP20132 328 aa11.57□□□□□ -0.56
PFDN1-207ENST00000524074 HEATR6Q6AI08 1181 aaKnown RBP11.57□□□□□ -0.56
PFDN1-207ENST00000524074 SMC5Q8IY18 1101 aa11.57□□□□□ -0.56
PFDN1-207ENST00000524074 AHI1Q8N157 1196 aa11.57□□□□□ -0.56
PFDN1-207ENST00000524074 LEO1Q8WVC0 666 aaPredicted RBP11.57□□□□□ -0.56
PFDN1-207ENST00000524074 WNT10AQ9GZT5 417 aa11.57□□□□□ -0.56
PFDN1-207ENST00000524074 SUCOQ9UBS9 1254 aaKnown RBP11.57□□□□□ -0.56
PFDN1-207ENST00000524074 LINC01387J3KSC0 135 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 TP53P04637 393 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-207ENST00000524074 EPHX1P07099 455 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 BIRC2Q13490 618 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 TDRD10Q5VZ19 366 aaKnown RBP11.56□□□□□ -0.56
PFDN1-207ENST00000524074 PPFIBP1Q86W92 1011 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 LRRN4CLQ8ND94 238 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 NUDT8Q8WV74 236 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 WDR89Q96FK6 387 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-207ENST00000524074 HAUS7Q99871 368 aa11.56□□□□□ -0.56
PFDN1-207ENST00000524074 SLFN14P0C7P3 912 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 FGFR1P11362 822 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 STRN3Q13033 797 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
PFDN1-207ENST00000524074 STRA8Q7Z7C7 330 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 DDX1Q92499 740 aaKnown RBP11.55□□□□□ -0.56
PFDN1-207ENST00000524074 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
PFDN1-207ENST00000524074 USP26Q9BXU7 913 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 SUSD2Q9UGT4 822 aa11.55□□□□□ -0.56
PFDN1-207ENST00000524074 FSCN2O14926 492 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 PRODHO43272 600 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 PLIN1O60240 522 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 ITGAVP06756 1048 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 CTSBP07858 339 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 GNALP38405 381 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 MCL1Q07820 350 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 NECAB2Q7Z6G3 386 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 MCATQ8IVS2 390 aaKnown RBP11.54□□□□□ -0.56
PFDN1-207ENST00000524074 TMEM192Q8IY95 271 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 ASPSCR1Q9BZE9 553 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 HIF3AQ9Y2N7 669 aa11.54□□□□□ -0.56
PFDN1-207ENST00000524074 RGS13O14921 159 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 CAND2O75155 1236 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 EYA4O95677 639 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 PABPC1P11940 636 aaKnown RBP11.53□□□□□ -0.56
PFDN1-207ENST00000524074 ZNF227Q86WZ6 799 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 WDR66Q8TBY9 1149 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 TMEM87BQ96K49 555 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 CARD10Q9BWT7 1032 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 TJP2Q9UDY2 1190 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 KLF15Q9UIH9 416 aa11.53□□□□□ -0.56
PFDN1-207ENST00000524074 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-207ENST00000524074 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 ELOA3DA6NLF2 546 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-207ENST00000524074 CLEC3AO75596 197 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 DNAJC8O75937 253 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-207ENST00000524074 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 MX2P20592 715 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 GBP1P32455 592 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 NEK2P51955 445 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 ELOA3BQ3SY89 546 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 ELOA3Q8NG57 546 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 MTMR8Q96EF0 704 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
PFDN1-207ENST00000524074 GBP3Q9H0R5 595 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 JPH1Q9HDC5 661 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-207ENST00000524074 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
PFDN1-207ENST00000524074 ALAS2P22557 587 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 NEK4P51957 841 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 LRRC41Q15345 812 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 MAP9Q49MG5 647 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 TRIM61Q5EBN2 209 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 PPM1JQ5JR12 505 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 SLC6A19Q695T7 634 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 ADAT2Q7Z6V5 191 aaKnown RBP11.51□□□□□ -0.57
PFDN1-207ENST00000524074 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 FGD4Q96M96 766 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 MDFIQ99750 246 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 SLC5A4Q9NY91 659 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 APEX2Q9UBZ4 518 aa11.51□□□□□ -0.57
PFDN1-207ENST00000524074 FANCGO15287 622 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 NPTXRO95502 500 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 ATF3P18847 181 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 ERVK-24P63145 666 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 RING1Q06587 406 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 RNF219Q5W0B1 726 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-207ENST00000524074 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 FCHSD1Q86WN1 690 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 HID1Q8IV36 788 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 CCDC144CPQ8IYA2 1237 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-207ENST00000524074 VWA5B2Q8N398 1253 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 KLHL25Q9H0H3 589 aa11.5□□□□□ -0.57
PFDN1-207ENST00000524074 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
PFDN1-207ENST00000524074 C9IYK1 514 aa11.49□□□□□ -0.57
PFDN1-207ENST00000524074 NOP56O00567 594 aaKnown RBP11.49□□□□□ -0.57
PFDN1-207ENST00000524074 AOC2O75106 756 aa11.49□□□□□ -0.57
PFDN1-207ENST00000524074 UBOX5O94941 541 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms