RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	ATF7IP	Q6VMQ6	1270 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	CLUAP1	Q96AJ1	413 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	C1QTNF1	Q9BXJ1	281 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	CEP126	Q9P2H0	1117 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	HERC5	Q9UII4	1024 aa	Known RBP	13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	RABGAP1	Q9Y3P9	1069 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	TACC3	Q9Y6A5	838 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	RLF	Q13129	1914 aa		13.32	□□□□□ -0.28
SORBS3-222	ENST00000524057	KBTBD13	C9JR72	458 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	ASNS	P08243	561 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	ADORA1	P30542	326 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	RASGRF1	Q13972	1273 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	CCDC85B	Q15834	202 aa	Predicted RBP	13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	WDR78	Q5VTH9	848 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	TMEM57	Q8N5G2	664 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	FRAT1	Q92837	279 aa	Predicted RBP	13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	TIFA	Q96CG3	184 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	PI4KB	Q9UBF8	816 aa		13.31	□□□□□ -0.28
SORBS3-222	ENST00000524057	MAP4K4	O95819	1239 aa	Predicted RBP	13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	MYCN	P04198	464 aa	Predicted RBP	13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	CCNA1	P78396	465 aa		13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	GRB14	Q14449	540 aa		13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	ERICH6	Q7L0X2	663 aa		13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	YTHDC1	Q96MU7	727 aa	Known RBP	13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	NECAB3	Q96P71	396 aa	Predicted RBP	13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	GAS2L1	Q99501	681 aa	Predicted RBP	13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	SIL1	Q9H173	461 aa		13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	PRDM12	Q9H4Q4	367 aa		13.3	□□□□□ -0.28
SORBS3-222	ENST00000524057	KIAA0355	O15063	1070 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	CLTB	P09497	229 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	RAG1	P15918	1043 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	TIMM10	P62072	90 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	ADGRE1	Q14246	886 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	LRRC41	Q15345	812 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	ZKSCAN2	Q63HK3	967 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	FBXO3	Q9UK99	471 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	ATAD5	Q96QE3	1844 aa		13.29	□□□□□ -0.28
SORBS3-222	ENST00000524057	GRXCR1	A8MXD5	290 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	SEPT4	O43236	478 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	CIAO1	O76071	339 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	LDHC	P07864	332 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	BMP1	P13497	986 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	PBX2	P40425	430 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	FPGS	Q05932	587 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	PRAMEF19	Q5SWL8	479 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	USP17L2	Q6R6M4	530 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	NSUN4	Q96CB9	384 aa	Known RBP	13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	LRFN3	Q9BTN0	628 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	DNAJC18	Q9H819	358 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	BTBD7	Q9P203	1132 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	IVNS1ABP	Q9Y6Y0	642 aa		13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	PDS5A	Q29RF7	1337 aa	Known RBP	13.28	□□□□□ -0.28
SORBS3-222	ENST00000524057	XIRP2	A4UGR9	3374 aa		13.27	□□□□□ -0.28
SORBS3-222	ENST00000524057	NCOR1	O75376	2440 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L15	C9J2P7	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L13	C9JLJ4	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L11	C9JVI0	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L18	D6R9N7	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L22	D6RA61	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L17	D6RBQ6	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L19	D6RCP7	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L20	D6RJB6	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	GDF11	O95390	407 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP17L24	Q0WX57	530 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	OLFML2B	Q68BL8	750 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	CATSPERG	Q6ZRH7	1159 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	TBC1D9	Q6ZT07	1266 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	DPP9	Q86TI2	863 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	METTL16	Q86W50	562 aa	Known RBP	13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	TEX11	Q8IYF3	940 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	IL27	Q8NEV9	243 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	PANK1	Q8TE04	598 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	PBX4	Q9BYU1	374 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	DHX36	Q9H2U1	1008 aa	Known RBP	13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	GINM1	Q9NU53	330 aa		13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.27	□□□□□ -0.29
SORBS3-222	ENST00000524057	IPO8	O15397	1037 aa	Known RBP	13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	IL15	P40933	162 aa	Predicted RBP	13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	GSTO1	P78417	241 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	C20orf194	Q5TEA3	1177 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	C16orf59	Q7L2K0	433 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.26	□□□□□ -0.29	4e-9	■■□□□ 13.3
SORBS3-222	ENST00000524057	EPHX3	Q9H6B9	360 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	TMEM39A	Q9NV64	488 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	RCAN3	Q9UKA8	241 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	ZBTB21	Q9ULJ3	1066 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	PHF24	Q9UPV7	400 aa		13.26	□□□□□ -0.29
SORBS3-222	ENST00000524057	PQBP1	O60828	265 aa	Known RBP	13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	COBL	O75128	1261 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	UBTFL1	P0CB47	393 aa	Predicted RBP	13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	IGFBP4	P22692	258 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	FAAP100	Q0VG06	881 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	FAM47A	Q5JRC9	791 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	LBX2	Q6XYB7	198 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	C12orf42	Q96LP6	360 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms