RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	BSDC1	Q9NW68	430 aa	Predicted RBP	9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	DACT1	Q9NYF0	836 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	MINPP1	Q9UNW1	487 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	DICER1	Q9UPY3	1922 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	SCN4A	P35499	1836 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	XDH	P47989	1333 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	WTIP	A6NIX2	430 aa	Predicted RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	CFH	P08603	1231 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	ATP5J	P18859	108 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	ADD1	P35611	737 aa	Known RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	USP46	P62068	366 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	NCBP1	Q09161	790 aa	Known RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZSCAN25	Q6NSZ9	544 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	FAM173B	Q6P4H8	233 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	DLK2	Q6UY11	383 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	KRT26	Q7Z3Y9	468 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	PODN	Q7Z5L7	613 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	SPC24	Q8NBT2	197 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	PROCA1	Q8NCQ7	364 aa	Predicted RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	HHIPL1	Q96JK4	782 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	SPATA32	Q96LK8	384 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	GTPBP4	Q9BZE4	634 aa	Known RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	TNMD	Q9H2S6	317 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	COPRS	Q9NQ92	184 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	C9orf78	Q9NZ63	289 aa	Predicted RBP	9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	CCDC88A	Q3V6T2	1871 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	RTL9	Q8NET4	1388 aa		9.12	□□□□□ -0.95
SPIDR-223	ENST00000524033	SALL1	Q9NSC2	1324 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	USP17L3	A6NCW0	530 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	USP17L4	A6NCW7	530 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	JAK2	O60674	1132 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	DTNB	O60941	627 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	AOC2	O75106	756 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	NR1I2	O75469	434 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	IGHMBP2	P38935	993 aa	Known RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	GCGR	P47871	477 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	RABL6	Q3YEC7	729 aa	Predicted RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	NAA16	Q6N069	864 aa	Predicted RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	USP17L1	Q7RTZ2	530 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	CCDC186	Q7Z3E2	898 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	FERMT3	Q86UX7	667 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	TICAM2	Q86XR7	235 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	C2orf69	Q8N8R5	385 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	AGBL3	Q8NEM8	1001 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	BRF1	Q92994	677 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	LLPH	Q9BRT6	129 aa	Known RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	FSD1	Q9BTV5	496 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	AGXT2	Q9BYV1	514 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	CCDC8	Q9H0W5	538 aa	Predicted RBP	9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	CACNA1S	Q13698	1873 aa		9.11	□□□□□ -0.95
SPIDR-223	ENST00000524033	ADAMTSL1	Q8N6G6	1762 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	MOXD2P	A6NHM9	499 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	CTAGE5	O15320	804 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	PFKFB2	O60825	505 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	CSF1R	P07333	972 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	SLC10A3	P09131	477 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	USP17L8	P0C7I0	530 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	NDUFV2	P19404	249 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	ITGA6	P23229	1130 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	HUNK	P57058	714 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZNF280A	P59817	542 aa	Predicted RBP	9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	LRMP	Q12912	555 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	CHAF1A	Q13111	956 aa	Predicted RBP	9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	SCARF1	Q14162	830 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	KIF4B	Q2VIQ3	1234 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	CCDC144B	Q3MJ40	725 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	EPHA10	Q5JZY3	1008 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	CCDC144CP	Q8IYA2	1237 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	PDCL2	Q8N4E4	241 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	WNT2B	Q93097	391 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	MRFAP1L1	Q96HT8	127 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	TCEANC2	Q96MN5	208 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	MPHOSPH8	Q99549	860 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	RCOR1	Q9UKL0	485 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	LEMD3	Q9Y2U8	911 aa		9.1	□□□□□ -0.95
SPIDR-223	ENST00000524033	LTBP1	Q14766	1721 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	ADM5	C9JUS6	153 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	NEMF	O60524	1076 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	HSPA8	P11142	646 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	KCNJ4	P48050	445 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZNF165	P49910	485 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	CASP7	P55210	303 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	PPP4C	P60510	307 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	TNNI3K	Q59H18	835 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	ATL3	Q6DD88	541 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	C11orf57	Q6ZUT1	292 aa	Predicted RBP	9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	NYAP1	Q6ZVC0	841 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	STOX1	Q6ZVD7	989 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	CKAP2L	Q8IYA6	745 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	OGFOD1	Q8N543	542 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	NSUN7	Q8NE18	718 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	ENGASE	Q8NFI3	743 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	CACTIN	Q8WUQ7	758 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	GML	Q99445	158 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	FEZ1	Q99689	392 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	PLA2G12B	Q9BX93	195 aa		9.09	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms