RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 PAGR1Q9BTK6 254 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 CRNKL1Q9BZJ0 848 aaKnown RBP22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 KIAA1683Q9H0B3 1180 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 PLXNB2O15031 1838 aa22.78■■□□□ 1.24
PTP4A3-206ENST00000524028 CNMDO75829 334 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 CAPN2P17655 700 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 DIS3LQ8TF46 1054 aaKnown RBP22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 SDR42E1Q8WUS8 393 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 USP6NLQ92738 828 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 NUDT12Q9BQG2 462 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 BOLA2Q9H3K6 86 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 RPTORQ8N122 1335 aa22.77■■□□□ 1.24
PTP4A3-206ENST00000524028 DDX60LQ5H9U9 1706 aaKnown RBP22.77■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L15C9J2P7 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L13C9JLJ4 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L11C9JVI0 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L18D6R9N7 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L22D6RA61 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L17D6RBQ6 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L19D6RCP7 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L20D6RJB6 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 CYP2D6P10635 497 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 MAPK4P31152 587 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 USP17L24Q0WX57 530 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 CATSPERGQ6ZRH7 1159 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 PAWRQ96IZ0 340 aaKnown RBP22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 HMX1Q9NP08 348 aaPredicted RBP22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 CABP5Q9NP86 173 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 DCP1AQ9NPI6 582 aaPredicted RBP22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 PAG1Q9NWQ8 432 aa22.76■■□□□ 1.23
PTP4A3-206ENST00000524028 XRCC5P13010 732 aaKnown RBP22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 ATP5JP18859 108 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 VCAM1P19320 739 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 USP14P54578 494 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 SEPT2Q15019 361 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 MORN1Q5T089 497 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 GPR142Q7Z601 462 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 GTF3C2Q8WUA4 911 aaPredicted RBP22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 SOCS4Q8WXH5 440 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 ARMT1Q9H993 441 aa22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 RBM27Q9P2N5 1060 aaKnown RBP22.75■■□□□ 1.23
PTP4A3-206ENST00000524028 PRKAB2O43741 272 aa22.74■■□□□ 1.23
PTP4A3-206ENST00000524028 CHGBP05060 677 aa22.74■■□□□ 1.23
PTP4A3-206ENST00000524028 MNX1P50219 401 aaPredicted RBP22.74■■□□□ 1.23
PTP4A3-206ENST00000524028 RABGAP1Q9Y3P9 1069 aa22.74■■□□□ 1.23
PTP4A3-206ENST00000524028 A0A1W2PRG0 241 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 ADD2P35612 726 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 CCL14Q16627 93 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 PLEKHH3Q7Z736 793 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 SLC44A5Q8NCS7 719 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 HAUS7Q99871 368 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 PRO3102Q9H379 93 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 CHMP4BQ9H444 224 aaKnown RBP22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 NR2E3Q9Y5X4 410 aa22.73■■□□□ 1.23
PTP4A3-206ENST00000524028 PRKAR2AP13861 404 aaKnown RBP22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 CCAR1Q8IX12 1150 aaKnown RBP22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 DYNLL2Q96FJ2 89 aa22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 RPAP3Q9H6T3 665 aaPredicted RBP22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 BTBD7Q9P203 1132 aa22.72■■□□□ 1.23
PTP4A3-206ENST00000524028 TRIOBPQ9H2D6 2365 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 SMIM22K7EJ46 135 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 MPHOSPH10O00566 681 aaKnown RBP22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 EVI5O60447 810 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 MBD4O95243 580 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 CACNB2Q08289 660 aaPredicted RBP22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 LBX2Q6XYB7 198 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 NECAB2Q7Z6G3 386 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 ANKLE1Q8NAG6 615 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 RANBP2P49792 3224 aaKnown RBP22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
PTP4A3-206ENST00000524028 ZKSCAN1P17029 563 aaPredicted RBP22.7■■□□□ 1.22
PTP4A3-206ENST00000524028 RGS2P41220 211 aa22.7■■□□□ 1.22
PTP4A3-206ENST00000524028 OGDHLQ9ULD0 1010 aa22.7■■□□□ 1.22
PTP4A3-206ENST00000524028 SPDYE16A6NNV3 312 aaPredicted RBP22.69■■□□□ 1.22
PTP4A3-206ENST00000524028 KIAA1755Q5JYT7 1200 aa22.69■■□□□ 1.22
PTP4A3-206ENST00000524028 SIAH1Q8IUQ4 282 aa22.69■■□□□ 1.22
PTP4A3-206ENST00000524028 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
PTP4A3-206ENST00000524028 LRRCC1Q9C099 1032 aa22.69■■□□□ 1.22
PTP4A3-206ENST00000524028 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 CCND3P30281 292 aaPredicted RBP22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 MAP2K5Q13163 448 aa22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 APBA2Q99767 749 aa22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 ATP8A2Q9NTI2 1148 aa22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 FLRT1Q9NZU1 646 aa22.68■■□□□ 1.22
PTP4A3-206ENST00000524028 AKR1B1P15121 316 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 PTPREP23469 700 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 CCNA1P78396 465 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 UBE3CQ15386 1083 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 TMEM179Q6ZVK1 233 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 CLEC10AQ8IUN9 316 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 NBPF3Q9H094 633 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 CWC22Q9HCG8 908 aaKnown RBP22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 SWAP70Q9UH65 585 aa22.67■■□□□ 1.22
PTP4A3-206ENST00000524028 C12orf60Q5U649 245 aa22.66■■□□□ 1.22
PTP4A3-206ENST00000524028 WDR78Q5VTH9 848 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms