RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 IGF2BP3O00425 579 aaKnown RBP eCLIP6.07□□□□□ -1.44
PCM1-220ENST00000523896 LRIG2O94898 1065 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 FGRP09769 529 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 DNAJA1P31689 397 aaKnown RBP6.07□□□□□ -1.44
PCM1-220ENST00000523896 OXCT1P55809 520 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 CBLL1Q75N03 491 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 ARMCX6Q7L4S7 300 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 FOXQ1Q9C009 403 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 RC3H2Q9HBD1 1191 aaKnown RBP6.07□□□□□ -1.44
PCM1-220ENST00000523896 BRMS1Q9HCU9 246 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 GINM1Q9NU53 330 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
PCM1-220ENST00000523896 EFR3BQ9Y2G0 817 aa6.07□□□□□ -1.44
PCM1-220ENST00000523896 ATE1O95260 518 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 CD8BP10966 210 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 YBX3P16989 372 aaKnown RBP eCLIP6.06□□□□□ -1.44
PCM1-220ENST00000523896 FUT4P22083 530 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
PCM1-220ENST00000523896 ZNF165P49910 485 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 ZNF746Q6NUN9 644 aaPredicted RBP6.06□□□□□ -1.44
PCM1-220ENST00000523896 NFXL1Q6ZNB6 911 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 SPRED2Q7Z698 418 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 EHMT1Q9H9B1 1298 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 STRIP2Q9ULQ0 834 aa6.06□□□□□ -1.44
PCM1-220ENST00000523896 FAM155AB1AL88 458 aaPredicted RBP6.05□□□□□ -1.44
PCM1-220ENST00000523896 NTF4P34130 210 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 PDE4BQ07343 736 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 IKZF1Q13422 519 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 MCF2L2Q86YR7 1114 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 HID1Q8IV36 788 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 MIPEPQ99797 713 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 TANGO6Q9C0B7 1094 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 WNT10AQ9GZT5 417 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 MAPK8IP1Q9UQF2 711 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 PCDHB14Q9Y5E9 798 aa6.05□□□□□ -1.44
PCM1-220ENST00000523896 BTBD11A6QL63 1104 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 HTR3BO95264 441 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 IMPDH2P12268 514 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 ITGB5P18084 799 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 CYP7A1P22680 504 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 MCM4P33991 863 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 CLCN7P51798 805 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 GK5Q6ZS86 529 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 MFSD2AQ8NA29 543 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 DRC1Q96MC2 740 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.04□□□□□ -1.44
PCM1-220ENST00000523896 ADAM30Q9UKF2 790 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
PCM1-220ENST00000523896 GRIN3BO60391 1043 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 GRK4P32298 578 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 CLCQ05315 142 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 TMEM201Q5SNT2 666 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 SFRP5Q5T4F7 317 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 UBE3DQ7Z6J8 389 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 ARMC5Q96C12 935 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 HEXIM2Q96MH2 286 aaKnown RBP6.03□□□□□ -1.44
PCM1-220ENST00000523896 SRRTQ9BXP5 876 aaKnown RBP6.03□□□□□ -1.44
PCM1-220ENST00000523896 TNKS2Q9H2K2 1166 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 PPT2Q9UMR5 302 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 PLAGL2Q9UPG8 496 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 CORINQ9Y5Q5 1042 aa6.03□□□□□ -1.44
PCM1-220ENST00000523896 MEIS3P2A8K0S8 358 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 PGRP06401 933 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 PLCG1P19174 1290 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 CD96P40200 585 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 ATG4DQ86TL0 474 aaPredicted RBP6.02□□□□□ -1.45
PCM1-220ENST00000523896 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 MFSD4AQ8N468 514 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 RBBP8NLQ8NC74 664 aaPredicted RBP6.02□□□□□ -1.45
PCM1-220ENST00000523896 FERD3LQ96RJ6 166 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 REV1Q9UBZ9 1251 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 U3KQE9 123 aa6.02□□□□□ -1.45
PCM1-220ENST00000523896 EOMESO95936 686 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
PCM1-220ENST00000523896 RNASE1P07998 156 aaKnown RBP6.01□□□□□ -1.45
PCM1-220ENST00000523896 ATP2B1P20020 1258 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 CAP2P40123 477 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 ZP2Q05996 745 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 MLECQ14165 292 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 LETMD1Q6P1Q0 360 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 CCDC81Q6ZN84 652 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 SPACA3Q8IXA5 215 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 ACSF2Q96CM8 615 aaPredicted RBP6.01□□□□□ -1.45
PCM1-220ENST00000523896 SHDQ96IW2 340 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 COX4I2Q96KJ9 171 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 FBRSQ9HAH7 460 aa6.01□□□□□ -1.45
PCM1-220ENST00000523896 SLITRK5O94991 958 aa6□□□□□ -1.45
PCM1-220ENST00000523896 PAPLNO95428 1278 aa6□□□□□ -1.45
PCM1-220ENST00000523896 GIPRP48546 466 aa6□□□□□ -1.45
PCM1-220ENST00000523896 EIF6P56537 245 aaKnown RBP6□□□□□ -1.45
PCM1-220ENST00000523896 SLBPQ14493 270 aaKnown RBP eCLIP6□□□□□ -1.45
PCM1-220ENST00000523896 LRRFIP1Q32MZ4 808 aaKnown RBP6□□□□□ -1.45
PCM1-220ENST00000523896 CDKAL1Q5VV42 579 aa6□□□□□ -1.45
PCM1-220ENST00000523896 PRAMEF13Q5VWM6 474 aa6□□□□□ -1.45
PCM1-220ENST00000523896 OGFOD2Q6N063 350 aa6□□□□□ -1.45
PCM1-220ENST00000523896 MRPL41Q8IXM3 137 aaKnown RBP6□□□□□ -1.45
PCM1-220ENST00000523896 LRRN4CLQ8ND94 238 aa6□□□□□ -1.45
PCM1-220ENST00000523896 OR6P1Q8NGX9 317 aa6□□□□□ -1.45
PCM1-220ENST00000523896 XAGE3Q8WTP9 111 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms