RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 CCDC74BQ96LY2 380 aa8.91□□□□□ -0.98
CPNE3-207ENST00000523588 KIF2CQ99661 725 aa8.91□□□□□ -0.98
CPNE3-207ENST00000523588 TINF2Q9BSI4 451 aa8.91□□□□□ -0.98
CPNE3-207ENST00000523588 TPX2Q9ULW0 747 aaKnown RBP8.91□□□□□ -0.98
CPNE3-207ENST00000523588 PLAGL2Q9UPG8 496 aa8.91□□□□□ -0.98
CPNE3-207ENST00000523588 RGS13O14921 159 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 IMPDH2P12268 514 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 ARTNQ5T4W7 220 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 C22orf34Q6ZV56 151 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 NLRC3Q7RTR2 1065 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-207ENST00000523588 SEC16BQ96JE7 1060 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
CPNE3-207ENST00000523588 PRR33A8MZF0 331 aa8.89□□□□□ -0.99
CPNE3-207ENST00000523588 NME1P15531 152 aaKnown RBP8.89□□□□□ -0.99
CPNE3-207ENST00000523588 ATF4P18848 351 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-207ENST00000523588 NASPP49321 788 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-207ENST00000523588 SFRP5Q5T4F7 317 aa8.89□□□□□ -0.99
CPNE3-207ENST00000523588 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
CPNE3-207ENST00000523588 PHACTR4Q8IZ21 702 aa8.89□□□□□ -0.99
CPNE3-207ENST00000523588 NETO1Q8TDF5 533 aa8.89□□□□□ -0.99
CPNE3-207ENST00000523588 TNKS2Q9H2K2 1166 aa8.89□□□□□ -0.99
CPNE3-207ENST00000523588 TNFRSF10CO14798 259 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 UBOX5O94941 541 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 CEACAM5P06731 702 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 ZNF865P0CJ78 1059 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-207ENST00000523588 RAG1P15918 1043 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 POLR2BP30876 1174 aaKnown RBP8.88□□□□□ -0.99
CPNE3-207ENST00000523588 ETV3P41162 512 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 NKPD1Q17RQ9 610 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 CCDC81Q6ZN84 652 aa8.88□□□□□ -0.99
CPNE3-207ENST00000523588 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 ADAMTS4O75173 837 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 PRNPP04156 253 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 ITIH2P19823 946 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 CYP7A1P22680 504 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 IFI16Q16666 785 aaKnown RBP8.87□□□□□ -0.99
CPNE3-207ENST00000523588 FBXW10Q5XX13 1052 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 SPACA3Q8IXA5 215 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 COX4I2Q96KJ9 171 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 PCMTD2Q9NV79 361 aa8.87□□□□□ -0.99
CPNE3-207ENST00000523588 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
CPNE3-207ENST00000523588 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 ACRP10323 421 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 INTS3Q68E01 1043 aaKnown RBP8.86□□□□□ -0.99
CPNE3-207ENST00000523588 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 LSRQ86X29 649 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-207ENST00000523588 VWCEQ96DN2 955 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 KREMEN1Q96MU8 473 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 SLC9A7Q96T83 725 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
CPNE3-207ENST00000523588 CAPN6Q9Y6Q1 641 aa8.86□□□□□ -0.99
CPNE3-207ENST00000523588 CBX7O95931 251 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 GBP1P32455 592 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 KIR3DL1P43629 444 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 GIPRP48546 466 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 RUFY4Q6ZNE9 571 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
CPNE3-207ENST00000523588 MFSD4AQ8N468 514 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 TAB3Q8N5C8 712 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-207ENST00000523588 RNF141Q8WVD5 230 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 SHDQ96IW2 340 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 Q96M66 194 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 ZFP64Q9NPA5 681 aa8.85□□□□□ -0.99
CPNE3-207ENST00000523588 CCNFP41002 786 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
CPNE3-207ENST00000523588 GNL2Q13823 731 aaKnown RBP8.84□□□□□ -0.99
CPNE3-207ENST00000523588 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 Q8N3U1 123 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 SLC43A3Q8NBI5 491 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 TM9SF2Q99805 663 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 CCDC39Q9UFE4 941 aa8.84□□□□□ -0.99
CPNE3-207ENST00000523588 TMEM265A0A087WTH1 108 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 TNK2Q07912 1038 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 VPS37DQ86XT2 251 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 TMEM192Q8IY95 271 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 BCL7CQ8WUZ0 217 aaPredicted RBP8.83□□□□□ -1
CPNE3-207ENST00000523588 FBXL18Q96ME1 805 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.83□□□□□ -1
CPNE3-207ENST00000523588 STRIP2Q9ULQ0 834 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 SNX11Q9Y5W9 270 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 ST14Q9Y5Y6 855 aa8.83□□□□□ -1
CPNE3-207ENST00000523588 LRRN2O75325 713 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 ZC3H6P61129 1189 aaKnown RBP8.82□□□□□ -1
CPNE3-207ENST00000523588 MISP3Q96FF7 219 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 CRBNQ96SW2 442 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 GMLQ99445 158 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 ASPNQ9BXN1 380 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 SEMA3GQ9NS98 782 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 VAV3Q9UKW4 847 aa8.82□□□□□ -1
CPNE3-207ENST00000523588 FAM155AB1AL88 458 aaPredicted RBP8.81□□□□□ -1
CPNE3-207ENST00000523588 FGRP09769 529 aa8.81□□□□□ -1
CPNE3-207ENST00000523588 GUCY2CP25092 1073 aa8.81□□□□□ -1
CPNE3-207ENST00000523588 CLCN7P51798 805 aa8.81□□□□□ -1
CPNE3-207ENST00000523588 PRKCQQ04759 706 aa8.81□□□□□ -1
CPNE3-207ENST00000523588 BNIP3Q12983 259 aa8.81□□□□□ -1
CPNE3-207ENST00000523588 ZYXQ15942 572 aaKnown RBP8.81□□□□□ -1
CPNE3-207ENST00000523588 SPRED2Q7Z698 418 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms