RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 SLC9C2Q5TAH2 1124 aa18.27■□□□□ 0.52
PCM1-218ENST00000523055 PROCA1Q8NCQ7 364 aaPredicted RBP18.27■□□□□ 0.52
PCM1-218ENST00000523055 OTUD7AQ8TE49 926 aaPredicted RBP18.27■□□□□ 0.52
PCM1-218ENST00000523055 PALD1Q9ULE6 856 aa18.27■□□□□ 0.52
PCM1-218ENST00000523055 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
PCM1-218ENST00000523055 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
PCM1-218ENST00000523055 RRP1BQ14684 758 aaKnown RBP18.26■□□□□ 0.51
PCM1-218ENST00000523055 LRRC26Q2I0M4 334 aa18.26■□□□□ 0.51
PCM1-218ENST00000523055 RIOK1Q9BRS2 568 aaKnown RBP18.26■□□□□ 0.51
PCM1-218ENST00000523055 DNAJC18Q9H819 358 aa18.26■□□□□ 0.51
PCM1-218ENST00000523055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCM1-218ENST00000523055 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
PCM1-218ENST00000523055 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
PCM1-218ENST00000523055 IGSF3O75054 1194 aa18.25■□□□□ 0.51
PCM1-218ENST00000523055 GCLCP48506 637 aaPredicted RBP18.25■□□□□ 0.51
PCM1-218ENST00000523055 MDM2Q00987 491 aaPredicted RBP18.25■□□□□ 0.51
PCM1-218ENST00000523055 LHX8Q68G74 356 aa18.25■□□□□ 0.51
PCM1-218ENST00000523055 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
PCM1-218ENST00000523055 TBC1D12O60347 775 aa18.24■□□□□ 0.51
PCM1-218ENST00000523055 PEX10O60683 326 aa18.24■□□□□ 0.51
PCM1-218ENST00000523055 PRKAR2AP13861 404 aaKnown RBP18.24■□□□□ 0.51
PCM1-218ENST00000523055 SPP2Q13103 211 aa18.24■□□□□ 0.51
PCM1-218ENST00000523055 ASCC2Q9H1I8 757 aaPredicted RBP18.24■□□□□ 0.51
PCM1-218ENST00000523055 ECHDC1Q9NTX5 307 aa18.24■□□□□ 0.51
PCM1-218ENST00000523055 MORF4L1Q9UBU8 362 aa18.24■□□□□ 0.51
PCM1-218ENST00000523055 CYP2B6P20813 491 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 SHROOM1Q2M3G4 852 aaPredicted RBP18.23■□□□□ 0.51
PCM1-218ENST00000523055 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 FAM161BQ96MY7 647 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 MAGEB6P1A0A0J9YX57 407 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 ADD2P35612 726 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 USP5P45974 858 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 HMGCS2P54868 508 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 EVX2Q03828 476 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
PCM1-218ENST00000523055 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
PCM1-218ENST00000523055 XRCC5P13010 732 aaKnown RBP18.22■□□□□ 0.51
PCM1-218ENST00000523055 JAG1P78504 1218 aa18.22■□□□□ 0.51
PCM1-218ENST00000523055 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
PCM1-218ENST00000523055 SH3D19Q5HYK7 790 aa18.22■□□□□ 0.51
PCM1-218ENST00000523055 ZNF280CQ8ND82 737 aa18.22■□□□□ 0.51
PCM1-218ENST00000523055 USP6NLQ92738 828 aa18.22■□□□□ 0.51
PCM1-218ENST00000523055 TXNRD2Q9NNW7 524 aa18.22■□□□□ 0.51
PCM1-218ENST00000523055 HDAC1Q13547 482 aaPredicted RBP18.21■□□□□ 0.51
PCM1-218ENST00000523055 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
PCM1-218ENST00000523055 ARMT1Q9H993 441 aa18.21■□□□□ 0.51
PCM1-218ENST00000523055 PRDM6Q9NQX0 595 aa18.21■□□□□ 0.51
PCM1-218ENST00000523055 HERC5Q9UII4 1024 aaKnown RBP18.21■□□□□ 0.51
PCM1-218ENST00000523055 MBD4O95243 580 aa18.2■□□□□ 0.5
PCM1-218ENST00000523055 CCND3P30281 292 aaPredicted RBP18.2■□□□□ 0.5
PCM1-218ENST00000523055 CAP2P40123 477 aa18.2■□□□□ 0.5
PCM1-218ENST00000523055 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
PCM1-218ENST00000523055 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
PCM1-218ENST00000523055 POTEEQ6S8J3 1075 aa18.2■□□□□ 0.5
PCM1-218ENST00000523055 PI4K2BQ8TCG2 481 aa18.2■□□□□ 0.5
PCM1-218ENST00000523055 GPATCH3Q96I76 525 aa18.2■□□□□ 0.5
PCM1-218ENST00000523055 SALL3Q9BXA9 1300 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 PRKAB2O43741 272 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 GDF11O95390 407 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 CCL14Q16627 93 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 ANKRD45Q5TZF3 282 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 METTL16Q86W50 562 aaKnown RBP18.19■□□□□ 0.5
PCM1-218ENST00000523055 CERS3Q8IU89 383 aa18.19■□□□□ 0.5
PCM1-218ENST00000523055 CRACR2BQ8N4Y2 399 aaPredicted RBP18.19■□□□□ 0.5
PCM1-218ENST00000523055 CDX2Q99626 313 aaPredicted RBP18.19■□□□□ 0.5
PCM1-218ENST00000523055 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCM1-218ENST00000523055 PLCD1P51178 756 aa18.18■□□□□ 0.5
PCM1-218ENST00000523055 P2RX7Q99572 595 aaKnown RBP18.18■□□□□ 0.5
PCM1-218ENST00000523055 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
PCM1-218ENST00000523055 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
PCM1-218ENST00000523055 IGHDP01880 384 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 HLA-DOAP06340 250 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 MX1P20591 662 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 PABPC4Q13310 644 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCM1-218ENST00000523055 Q3C1V9 767 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 FOXP4Q8IVH2 680 aaPredicted RBP18.17■□□□□ 0.5
PCM1-218ENST00000523055 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 SOCS4Q8WXH5 440 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 PUS7LQ9H0K6 701 aaKnown RBP18.17■□□□□ 0.5
PCM1-218ENST00000523055 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 FRMPD3Q5JV73 1810 aa18.17■□□□□ 0.5
PCM1-218ENST00000523055 SMIM22K7EJ46 135 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 CYP2D6P10635 497 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
PCM1-218ENST00000523055 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 MORN1Q5T089 497 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 TBC1D2Q9BYX2 928 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 PORCNQ9H237 461 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 DCP1AQ9NPI6 582 aaPredicted RBP18.16■□□□□ 0.5
PCM1-218ENST00000523055 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 RBPJLQ9UBG7 517 aa18.16■□□□□ 0.5
PCM1-218ENST00000523055 USP17L5A8MUK1 530 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 ZKSCAN1P17029 563 aaPredicted RBP18.15■□□□□ 0.5
PCM1-218ENST00000523055 ZNF697Q5TEC3 545 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 SEMA6BQ9H3T3 888 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 LTBP2Q14767 1821 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 HERVK_113P62684 666 aa18.15■□□□□ 0.5
PCM1-218ENST00000523055 AAMPQ13685 434 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms