RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 DYMQ7RTS9 669 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 ABI1Q8IZP0 508 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 PMFBP1Q8TBY8 1022 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 ZNF507Q8TCN5 953 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 GOLGA2P5Q9HBQ8 144 aa6.56□□□□□ -1.36
SKP1-210ENST00000522855 RAB6AP20340 208 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 ETFBP38117 255 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 ASPAP45381 313 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 VSIG10LQ86VR7 867 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 HID1Q8IV36 788 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 C19orf47Q8N9M1 422 aaKnown RBP6.55□□□□□ -1.36
SKP1-210ENST00000522855 DISC1Q9NRI5 854 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 CORINQ9Y5Q5 1042 aa6.55□□□□□ -1.36
SKP1-210ENST00000522855 PAX4O43316 350 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 HCLS1P14317 486 aaPredicted RBP6.54□□□□□ -1.36
SKP1-210ENST00000522855 MAP7Q14244 749 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 OVOS1Q6IE37 1185 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 DPH6Q7L8W6 267 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 TAB3Q8N5C8 712 aaPredicted RBP6.54□□□□□ -1.36
SKP1-210ENST00000522855 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
SKP1-210ENST00000522855 ACTR10Q9NZ32 417 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 KLHL3Q9UH77 587 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 SLC12A7Q9Y666 1083 aa6.54□□□□□ -1.36
SKP1-210ENST00000522855 SMAD7O15105 426 aaKnown RBP6.53□□□□□ -1.36
SKP1-210ENST00000522855 CYP26A1O43174 497 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
SKP1-210ENST00000522855 GUCY2CP25092 1073 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 NFE2L2Q16236 605 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 SLC6A19Q695T7 634 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 NLRC3Q7RTR2 1065 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 MRPL41Q8IXM3 137 aaKnown RBP6.53□□□□□ -1.36
SKP1-210ENST00000522855 SMYD4Q8IYR2 804 aaPredicted RBP6.53□□□□□ -1.36
SKP1-210ENST00000522855 FAM13CQ8NE31 585 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
SKP1-210ENST00000522855 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
SKP1-210ENST00000522855 NEFMP07197 916 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 NTF4P34130 210 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 CAP2P40123 477 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 CASP7P55210 303 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 RAB33AQ14088 237 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 CDCP2Q5VXM1 449 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 MCATQ8IVS2 390 aaKnown RBP6.52□□□□□ -1.37
SKP1-210ENST00000522855 SLFN12Q8IYM2 578 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 FAM169BQ8N8A8 192 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 ISL2Q96A47 359 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 ACSF2Q96CM8 615 aaPredicted RBP6.52□□□□□ -1.37
SKP1-210ENST00000522855 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
SKP1-210ENST00000522855 SIRPGQ9P1W8 387 aa6.52□□□□□ -1.37
SKP1-210ENST00000522855 ZC3H7BQ9UGR2 993 aaKnown RBP6.52□□□□□ -1.37
SKP1-210ENST00000522855 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 KLF4O43474 513 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 NME1P15531 152 aaKnown RBP6.51□□□□□ -1.37
SKP1-210ENST00000522855 RAG1P15918 1043 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 CCNFP41002 786 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 FXNQ16595 210 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
SKP1-210ENST00000522855 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
SKP1-210ENST00000522855 ATG4CQ96DT6 458 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 ZSWIM4Q9H7M6 989 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 CNNM2Q9H8M5 875 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 PAK6Q9NQU5 681 aaPredicted RBP6.51□□□□□ -1.37
SKP1-210ENST00000522855 TJP2Q9UDY2 1190 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
SKP1-210ENST00000522855 ANGEL1Q9UNK9 670 aaKnown RBP6.51□□□□□ -1.37
SKP1-210ENST00000522855 TNFRSF10CO14798 259 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 CYP27A1Q02318 531 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 SERINC3Q13530 473 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 CCDC144BQ3MJ40 725 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 ARSHQ5FYA8 562 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 NOP9Q86U38 636 aaKnown RBP6.5□□□□□ -1.37
SKP1-210ENST00000522855 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 CYB5D2Q8WUJ1 264 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 MKL1Q969V6 931 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 ANTXR1Q9H6X2 564 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 DAGLAQ9Y4D2 1042 aa6.5□□□□□ -1.37
SKP1-210ENST00000522855 LRIG2O94898 1065 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
SKP1-210ENST00000522855 ITGB5P18084 799 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 LARP1BQ659C4 914 aaKnown RBP6.49□□□□□ -1.37
SKP1-210ENST00000522855 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 ARMCX6Q7L4S7 300 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 TTC6Q86TZ1 520 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 MFSD2AQ8NA29 543 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
SKP1-210ENST00000522855 FBRSQ9HAH7 460 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 U3KQE9 123 aa6.49□□□□□ -1.37
SKP1-210ENST00000522855 A0A1W2PQH9 124 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms