RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 TNKSO95271 1327 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 WDR19Q8NEZ3 1342 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 IFIT3O14879 490 aaKnown RBP19.15■□□□□ 0.66
LSM1-204ENST00000522515 PTPRAP18433 802 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 NEK4P51957 841 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 RCSD1Q6JBY9 416 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 IGDCC4Q8TDY8 1250 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 KANSL2Q9H9L4 492 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
LSM1-204ENST00000522515 ICA1Q05084 483 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 SEC23AQ15436 765 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 SIAH1Q8IUQ4 282 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 ENAHQ8N8S7 591 aaPredicted RBP19.14■□□□□ 0.65
LSM1-204ENST00000522515 TMEM87BQ96K49 555 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 ELP3Q9H9T3 547 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 PDRG1Q9NUG6 133 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 STX8Q9UNK0 236 aa19.14■□□□□ 0.65
LSM1-204ENST00000522515 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 EEF2P13639 858 aaKnown RBP19.13■□□□□ 0.65
LSM1-204ENST00000522515 NOVP48745 357 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 HUNKP57058 714 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 SART3Q15020 963 aaKnown RBP19.13■□□□□ 0.65
LSM1-204ENST00000522515 RABEP1Q15276 862 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 TMEM67Q5HYA8 995 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 Q6ZUG5 572 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 TTC14Q96N46 770 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 MTA3Q9BTC8 594 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 SENP2Q9HC62 589 aa19.13■□□□□ 0.65
LSM1-204ENST00000522515 ERICH2A1L162 156 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 USP17L5A8MUK1 530 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 SH2B2O14492 632 aaPredicted RBP19.12■□□□□ 0.65
LSM1-204ENST00000522515 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 CCDC178Q5BJE1 867 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 SAPCD2Q86UD0 394 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 DGKHQ86XP1 1220 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 LY9Q9HBG7 655 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 CLIP2Q9UDT6 1046 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 ZHX2Q9Y6X8 837 aa19.12■□□□□ 0.65
LSM1-204ENST00000522515 TMEM88BA6NKF7 163 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 TTLL1O95922 423 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 WTAPQ15007 396 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 SLC10A4Q96EP9 437 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 AGXT2Q9BYV1 514 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 NYAP2Q9P242 653 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
LSM1-204ENST00000522515 A0A1W2PRG0 241 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 ECE1P42892 770 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 FGD1P98174 961 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 TOB2Q14106 344 aaPredicted RBP19.1■□□□□ 0.65
LSM1-204ENST00000522515 IFIT1BQ5T764 474 aaKnown RBP19.1■□□□□ 0.65
LSM1-204ENST00000522515 ERO1BQ86YB8 467 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 ACER1Q8TDN7 264 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 ANKS1AQ92625 1134 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 TMEM47Q9BQJ4 181 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 TLL2Q9Y6L7 1015 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 SPDYE5A6NIY4 337 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 LIFRP42702 1097 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 FBXL16Q8N461 479 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 BRF1Q92994 677 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 MKL1Q969V6 931 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 OTUD5Q96G74 571 aa19.1■□□□□ 0.65
LSM1-204ENST00000522515 ALDH8A1Q9H2A2 487 aaPredicted RBP19.1■□□□□ 0.65
LSM1-204ENST00000522515 TOP1P11387 765 aaKnown RBP19.09■□□□□ 0.65
LSM1-204ENST00000522515 APLP1P51693 650 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 AK2P54819 239 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 PPATQ06203 517 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 SPP2Q13103 211 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 PPP4R3BQ5MIZ7 849 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
LSM1-204ENST00000522515 ZNF280CQ8ND82 737 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 OPTNQ96CV9 577 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
LSM1-204ENST00000522515 WDR18Q9BV38 432 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 AS3MTQ9HBK9 375 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 ARHGEF10LQ9HCE6 1279 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 ABT1Q9ULW3 272 aaKnown RBP19.09■□□□□ 0.65
LSM1-204ENST00000522515 AFG3L2Q9Y4W6 797 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 MYH4Q9Y623 1939 aa19.09■□□□□ 0.65
LSM1-204ENST00000522515 KAT14Q9H8E8 782 aa19.08■□□□□ 0.65
LSM1-204ENST00000522515 TMX2Q9Y320 296 aa19.08■□□□□ 0.65
LSM1-204ENST00000522515 TRIM75PA6NK02 468 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 IRF6O14896 467 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 GJA5P36382 358 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 APOBRQ0VD83 1088 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 NFXL1Q6ZNB6 911 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 SGMS1Q86VZ5 419 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 TMTC2Q8N394 836 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 TBC1D2Q9BYX2 928 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 BRPF3Q9ULD4 1205 aa19.07■□□□□ 0.64
LSM1-204ENST00000522515 CCDC69A6NI79 296 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 USP17L10C9JJH3 530 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 ST18O60284 1047 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 CD2BP2O95400 341 aaKnown RBP19.06■□□□□ 0.64
LSM1-204ENST00000522515 PPIL2Q13356 520 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 MTMR2Q13614 643 aa19.06■□□□□ 0.64
LSM1-204ENST00000522515 ZYXQ15942 572 aaKnown RBP19.06■□□□□ 0.64
LSM1-204ENST00000522515 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
LSM1-204ENST00000522515 PNMA1Q8ND90 353 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms