RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ME3Q16798 604 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
CLK4-210ENST00000522136 MTA3Q9BTC8 594 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 MYL10Q9BUA6 226 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 MTMR4Q9NYA4 1195 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 STX8Q9UNK0 236 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 ATAD5Q96QE3 1844 aa15.71■□□□□ 0.11
CLK4-210ENST00000522136 RAB3GAP1Q15042 981 aa15.71■□□□□ 0.1
CLK4-210ENST00000522136 CCDC84Q86UT8 332 aaPredicted RBP15.71■□□□□ 0.1
CLK4-210ENST00000522136 IL27Q8NEV9 243 aa15.71■□□□□ 0.1
CLK4-210ENST00000522136 WRNIP1Q96S55 665 aa15.71■□□□□ 0.1
CLK4-210ENST00000522136 CABP5Q9NP86 173 aa15.71■□□□□ 0.1
CLK4-210ENST00000522136 CCDC69A6NI79 296 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 DTNBO60941 627 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 RXRAP19793 462 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 BECN1Q14457 450 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 MOB2Q70IA6 237 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 SGMS1Q86VZ5 419 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 DGKHQ86XP1 1220 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 NECAB1Q8N987 351 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 ZKSCAN4Q969J2 545 aaPredicted RBP15.7■□□□□ 0.1
CLK4-210ENST00000522136 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 KLRG1Q96E93 195 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 CLIP2Q9UDT6 1046 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 ZNF112Q9UJU3 913 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 ZBTB21Q9ULJ3 1066 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 MYH4Q9Y623 1939 aa15.7■□□□□ 0.1
CLK4-210ENST00000522136 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
CLK4-210ENST00000522136 EVCP57679 992 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 APOA5Q6Q788 366 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 SIAH1Q8IUQ4 282 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 TMTC2Q8N394 836 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 ZNF408Q9H9D4 720 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
CLK4-210ENST00000522136 CTNND1O60716 968 aaKnown RBP15.69■□□□□ 0.1
CLK4-210ENST00000522136 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
CLK4-210ENST00000522136 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 ANKS1AQ92625 1134 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 HPS5Q9UPZ3 1129 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 MTMR7Q9Y216 660 aa15.69■□□□□ 0.1
CLK4-210ENST00000522136 GOLGA8BA8MQT2 603 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 KIF3CO14782 793 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 EEF2P13639 858 aaKnown RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 NF2P35240 595 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 NOVP48745 357 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 ST3GAL1Q11201 340 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 MICU3Q86XE3 530 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 CCDC144CPQ8IYA2 1237 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 ZNF654Q8IZM8 581 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 LRRC47Q8N1G4 583 aaKnown RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 ZNF274Q96GC6 653 aaPredicted RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 KANSL2Q9H9L4 492 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 NCOA5Q9HCD5 579 aaKnown RBP15.68■□□□□ 0.1
CLK4-210ENST00000522136 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
CLK4-210ENST00000522136 TTLL1O95922 423 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 ICA1Q05084 483 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 TTLL12Q14166 644 aaPredicted RBP15.67■□□□□ 0.1
CLK4-210ENST00000522136 CCDC83Q8IWF9 413 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLK4-210ENST00000522136 NUP133Q8WUM0 1156 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 IPO9Q96P70 1041 aaKnown RBP15.67■□□□□ 0.1
CLK4-210ENST00000522136 SLKQ9H2G2 1235 aaPredicted RBP15.67■□□□□ 0.1
CLK4-210ENST00000522136 DOCK1Q14185 1865 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 ASNSP08243 561 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 TOP1P11387 765 aaKnown RBP15.67■□□□□ 0.1
CLK4-210ENST00000522136 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 ACER1Q8TDN7 264 aa15.67■□□□□ 0.1
CLK4-210ENST00000522136 OTOFQ9HC10 1997 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 ZBTB43O43298 467 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 ITGBL1O95965 494 aaPredicted RBP15.66■□□□□ 0.1
CLK4-210ENST00000522136 YY1P25490 414 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 SCRN1Q12765 414 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 SYNE3Q6ZMZ3 975 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.66■□□□□ 0.1
CLK4-210ENST00000522136 CATIPQ7Z7H3 387 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 SCYL3Q8IZE3 742 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
CLK4-210ENST00000522136 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 PFKFB2O60825 505 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 ECE1P42892 770 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 TROAPQ12815 778 aa15.66■□□□□ 0.1
CLK4-210ENST00000522136 UBE2Q2LH0YL09 131 aa15.65■□□□□ 0.1
CLK4-210ENST00000522136 CDC27P30260 824 aa15.65■□□□□ 0.1
CLK4-210ENST00000522136 IREB2P48200 963 aaKnown RBP15.65■□□□□ 0.1
CLK4-210ENST00000522136 CUL4AQ13619 759 aa15.65■□□□□ 0.1
CLK4-210ENST00000522136 VGLL4Q14135 290 aa15.65■□□□□ 0.1
CLK4-210ENST00000522136 GTF3C6Q969F1 213 aa15.65■□□□□ 0.1
CLK4-210ENST00000522136 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms