RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 CENPBP07199 599 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 CAP1Q01518 475 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 ICA1Q05084 483 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 KIF22Q14807 665 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 MCMDC2Q4G0Z9 681 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 SBK1Q52WX2 424 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 NOM1Q5C9Z4 860 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 USP17L2Q6R6M4 530 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 TMEM179Q6ZVK1 233 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 ARHGAP39Q9C0H5 1083 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 EFCC1Q9HA90 598 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 CCDC171Q6TFL3 1326 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 ROBO3Q96MS0 1386 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 MGAMO43451 1857 aa9.98□□□□□ -0.81
CTNNA1-231ENST00000521941 MYH4Q9Y623 1939 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 CCDC85CA6NKD9 419 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 C19orf81C9J6K1 198 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 FOXP2O15409 715 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 RASA1P20936 1047 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 OSBPP22059 807 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 PPARAQ07869 468 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 PABPC4Q13310 644 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 SH3D19Q5HYK7 790 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 OTOP1Q7RTM1 612 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 ANKRD13CQ8N6S4 541 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 CCDC136Q96JN2 1154 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 ARHGEF10LQ9HCE6 1279 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 TOMM22Q9NS69 142 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 EMILIN3Q9NT22 766 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 ADGRA2Q96PE1 1338 aa9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 GREB1LQ9C091 1923 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-231ENST00000521941 LAMA4Q16363 1823 aa9.96□□□□□ -0.81
CTNNA1-231ENST00000521941 A0A1W2PRG0 241 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 PEX10O60683 326 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 SLC3A2P08195 630 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 USP14P54578 494 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 HAND2P61296 217 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 LACTBP83111 547 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 IFFO2Q5TF58 517 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 C17orf99Q6UX52 265 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 CCDC17Q96LX7 622 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 PAGR1Q9BTK6 254 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
CTNNA1-231ENST00000521941 HIP1O00291 1037 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 FMNL1O95466 1100 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 HSPD1P10809 573 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 BCRP11274 1271 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 EEF2P13639 858 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 VCAM1P19320 739 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 PSMC4P43686 418 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 MFAP1P55081 439 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 PDE4BQ07343 736 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 FAM47AQ5JRC9 791 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 RRP12Q5JTH9 1297 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 FBXO46Q6PJ61 603 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 ZNF444Q8N0Y2 327 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 SPICE1Q8N0Z3 855 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 TANGO6Q9C0B7 1094 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 KIAA1683Q9H0B3 1180 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 ZNF287Q9HBT7 754 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
CTNNA1-231ENST00000521941 TSPY3P0CV98 308 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 TSPY8P0CW00 308 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 CTGFP29279 349 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 HERVK_113P62684 666 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 ARHGEF6Q15052 776 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 PKN2Q16513 984 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 CHMP4CQ96CF2 233 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 TRIM47Q96LD4 638 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 C12orf42Q96LP6 360 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 P2RX7Q99572 595 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 IL25Q9H293 177 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 TAOK2Q9UL54 1235 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 ISY1Q9ULR0 285 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 PTPN22Q9Y2R2 807 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 PTCH2Q9Y6C5 1203 aa9.94□□□□□ -0.82
CTNNA1-231ENST00000521941 MYPNQ86TC9 1320 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 TSPY2A6NKD2 308 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 TNPO2O14787 897 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 RANBP6O60518 1105 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 MYCP01106 439 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-231ENST00000521941 FGAP02671 866 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms