RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 PPP4CP60510 307 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 GRIN1Q05586 938 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 HOXA10P31260 410 aaPredicted RBP16.09■□□□□ 0.17
SMIM12-206ENST00000521580 NLRP12P59046 1061 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 PNOCQ13519 176 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
SMIM12-206ENST00000521580 RTFDC1Q9BY42 306 aaPredicted RBP16.09■□□□□ 0.17
SMIM12-206ENST00000521580 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.17
SMIM12-206ENST00000521580 CNTNAP5Q8WYK1 1306 aa16.08■□□□□ 0.17
SMIM12-206ENST00000521580 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 ZBTB22O15209 634 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 IL1R1P14778 569 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 KIF5BP33176 963 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 PLCD1P51178 756 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 NOLC1Q14978 699 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMIM12-206ENST00000521580 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
SMIM12-206ENST00000521580 PTPREP23469 700 aa16.08■□□□□ 0.16
SMIM12-206ENST00000521580 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
SMIM12-206ENST00000521580 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.08■□□□□ 0.16
SMIM12-206ENST00000521580 FBXO2Q9UK22 296 aaPredicted RBP16.08■□□□□ 0.16
SMIM12-206ENST00000521580 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
SMIM12-206ENST00000521580 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 IL17RBQ9NRM6 502 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 PYCARDQ9ULZ3 195 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 BAZ2BQ9UIF8 2168 aaKnown RBP16.07■□□□□ 0.16
SMIM12-206ENST00000521580 IGSF3O75054 1194 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 NLRP5P59047 1200 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 GTF2IP78347 998 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 KRBA2Q6ZNG9 492 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 PDILTQ8N807 584 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 CCDC88AQ3V6T2 1871 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 SARM1Q6SZW1 724 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
SMIM12-206ENST00000521580 SCG2P13521 617 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
SMIM12-206ENST00000521580 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 FAM237AA0A1B0GTK4 181 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 ZNF827Q17R98 1081 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 F8W031 263 aaPredicted RBP16.06■□□□□ 0.16
SMIM12-206ENST00000521580 POLR2DO15514 142 aaKnown RBP16.06■□□□□ 0.16
SMIM12-206ENST00000521580 APBA3O96018 575 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 TBC1D22AQ8WUA7 517 aa16.06■□□□□ 0.16
SMIM12-206ENST00000521580 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
SMIM12-206ENST00000521580 LRMPQ12912 555 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
SMIM12-206ENST00000521580 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
SMIM12-206ENST00000521580 SRPRBQ9Y5M8 271 aaKnown RBP16.05■□□□□ 0.16
SMIM12-206ENST00000521580 PLCG2P16885 1265 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 TPM4P67936 248 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 ZNF174Q15697 407 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
SMIM12-206ENST00000521580 NLGN1Q8N2Q7 840 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 CSRNP2Q9H175 543 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
SMIM12-206ENST00000521580 FOXN1O15353 648 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
SMIM12-206ENST00000521580 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 ZNF287Q9HBT7 754 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 HOOK1Q9UJC3 728 aaKnown RBP16.04■□□□□ 0.16
SMIM12-206ENST00000521580 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 KIAA1524Q8TCG1 905 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
SMIM12-206ENST00000521580 TUBE1Q9UJT0 475 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 PCDHA5Q9Y5H7 936 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
SMIM12-206ENST00000521580 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 SERTAD1Q9UHV2 236 aa16.04■□□□□ 0.16
SMIM12-206ENST00000521580 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
SMIM12-206ENST00000521580 SMC2O95347 1197 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 RASA1P20936 1047 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 CCDC178Q5BJE1 867 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 G3V3G9 751 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 CDC25BP30305 580 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 CDK8P49336 464 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 GPKOWQ92917 476 aaPredicted RBP eCLIP16.03■□□□□ 0.16
SMIM12-206ENST00000521580 EYA3Q99504 573 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 FLT1P17948 1338 aa16.03■□□□□ 0.16
SMIM12-206ENST00000521580 HMGB2P26583 209 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms