RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 RCSD1Q6JBY9 416 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 LRRC8AQ8IWT6 810 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 FAM13BQ9NYF5 915 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 CEP131Q9UPN4 1083 aa29.55■■■□□ 2.32
COL13A1-213ENST00000520267 C15orf52Q6ZUT6 534 aaKnown RBP29.54■■■□□ 2.32
COL13A1-213ENST00000520267 CERKQ8TCT0 537 aa29.54■■■□□ 2.32
COL13A1-213ENST00000520267 SMTNL1A8MU46 457 aa29.54■■■□□ 2.32
COL13A1-213ENST00000520267 MDM2Q00987 491 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-213ENST00000520267 CRY2Q49AN0 593 aa29.54■■■□□ 2.32
COL13A1-213ENST00000520267 ZNF579Q8NAF0 562 aaKnown RBP29.54■■■□□ 2.32
COL13A1-213ENST00000520267 BAZ2BQ9UIF8 2168 aaKnown RBP29.53■■■□□ 2.32
COL13A1-213ENST00000520267 SERPINB2P05120 415 aa29.53■■■□□ 2.32
COL13A1-213ENST00000520267 FILIP1Q7Z7B0 1213 aa29.53■■■□□ 2.32
COL13A1-213ENST00000520267 DYNLL2Q96FJ2 89 aa29.53■■■□□ 2.32
COL13A1-213ENST00000520267 TRPC5Q9UL62 973 aaPredicted RBP29.53■■■□□ 2.32
COL13A1-213ENST00000520267 PCDHA5Q9Y5H7 936 aa29.53■■■□□ 2.32
COL13A1-213ENST00000520267 NPY5RQ15761 445 aa29.52■■■□□ 2.32
COL13A1-213ENST00000520267 TRIM75PA6NK02 468 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 IKBKBO14920 756 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 POLR2DO15514 142 aaKnown RBP29.51■■■□□ 2.32
COL13A1-213ENST00000520267 GSTO1P78417 241 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 TFAP4Q01664 338 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 NOM1Q5C9Z4 860 aaKnown RBP29.51■■■□□ 2.32
COL13A1-213ENST00000520267 ELOA2Q8IYF1 753 aaPredicted RBP29.51■■■□□ 2.32
COL13A1-213ENST00000520267 CSRNP2Q9H175 543 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 IFNKQ9P0W0 207 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 SERTAD1Q9UHV2 236 aa29.51■■■□□ 2.32
COL13A1-213ENST00000520267 IGSF3O75054 1194 aa29.51■■■□□ 2.31
COL13A1-213ENST00000520267 TPM4P67936 248 aa29.51■■■□□ 2.31
COL13A1-213ENST00000520267 USP49Q70CQ1 688 aa29.51■■■□□ 2.31
COL13A1-213ENST00000520267 TNFRSF25Q93038 417 aa29.51■■■□□ 2.31
COL13A1-213ENST00000520267 PRIMPOLQ96LW4 560 aa29.51■■■□□ 2.31
COL13A1-213ENST00000520267 XPO4Q9C0E2 1151 aaKnown RBP29.51■■■□□ 2.31
COL13A1-213ENST00000520267 WNT7AO00755 349 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 UFL1O94874 794 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 ST5P78524 1137 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 HSD3B7Q9H2F3 369 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 IL17RBQ9NRM6 502 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 NAV1Q8NEY1 1877 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 SMC2O95347 1197 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 PPP4CP60510 307 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 TGFBRAP1Q8WUH2 860 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 CD209Q9NNX6 404 aa29.5■■■□□ 2.31
COL13A1-213ENST00000520267 BAG3O95817 575 aa29.49■■■□□ 2.31
COL13A1-213ENST00000520267 LMOD1P29536 600 aaPredicted RBP29.49■■■□□ 2.31
COL13A1-213ENST00000520267 MYRIPQ8NFW9 859 aa29.49■■■□□ 2.31
COL13A1-213ENST00000520267 PRR29P0C7W0 189 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 VEGFAP15692 232 aaPredicted RBP29.48■■■□□ 2.31
COL13A1-213ENST00000520267 BMP6P22004 513 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 ATP2B4P23634 1241 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 HSPA1LP34931 641 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 RBM17Q96I25 401 aaKnown RBP29.48■■■□□ 2.31
COL13A1-213ENST00000520267 BRMS1Q9HCU9 246 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 ROBO3Q96MS0 1386 aa29.48■■■□□ 2.31
COL13A1-213ENST00000520267 CDK5RAP2Q96SN8 1893 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 NEMFO60524 1076 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 SCG2P13521 617 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 POSTNQ15063 836 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 PDILTQ8N807 584 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 RTFDC1Q9BY42 306 aaPredicted RBP29.47■■■□□ 2.31
COL13A1-213ENST00000520267 KAT14Q9H8E8 782 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 MORC2Q9Y6X9 1032 aaPredicted RBP29.47■■■□□ 2.31
COL13A1-213ENST00000520267 NOL10Q9BSC4 688 aaKnown RBP29.47■■■□□ 2.31
COL13A1-213ENST00000520267 GGA1Q9UJY5 639 aa29.47■■■□□ 2.31
COL13A1-213ENST00000520267 LDHCP07864 332 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 DGKHQ86XP1 1220 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 HOOK1Q9UJC3 728 aaKnown RBP29.46■■■□□ 2.31
COL13A1-213ENST00000520267 ATP1A3P13637 1013 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 MYL5Q02045 173 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 PFKFB3Q16875 520 aaPredicted RBP29.46■■■□□ 2.31
COL13A1-213ENST00000520267 OLFM4Q6UX06 510 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 MAPKAPK5Q8IW41 473 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 GRAMD1CQ8IYS0 662 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 MKNK2Q9HBH9 465 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 MAN1B1Q9UKM7 699 aa29.46■■■□□ 2.31
COL13A1-213ENST00000520267 ACTN4O43707 911 aaKnown RBP29.45■■■□□ 2.31
COL13A1-213ENST00000520267 FANCCQ00597 558 aa29.45■■■□□ 2.31
COL13A1-213ENST00000520267 SLC44A5Q8NCS7 719 aa29.45■■■□□ 2.31
COL13A1-213ENST00000520267 SAP30BPQ9UHR5 308 aaKnown RBP29.45■■■□□ 2.31
COL13A1-213ENST00000520267 DYNC1I1O14576 645 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 IL1R1P14778 569 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 KIF5BP33176 963 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 PLCD1P51178 756 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 CCZ1BP86790 482 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 CCZ1P86791 482 aaPredicted RBP29.45■■■□□ 2.3
COL13A1-213ENST00000520267 DDR1Q08345 913 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 ZNF174Q15697 407 aa29.45■■■□□ 2.3
COL13A1-213ENST00000520267 OSBPL5Q9H0X9 879 aaPredicted RBP29.45■■■□□ 2.3
COL13A1-213ENST00000520267 USP17L3A6NCW0 530 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 USP17L4A6NCW7 530 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 ADAMTS3O15072 1205 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 NLRP5P59047 1200 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 SLC27A3Q5K4L6 730 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 USP17L1Q7RTZ2 530 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 PNMA1Q8ND90 353 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 ANKS1AQ92625 1134 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 IMPACTQ9P2X3 320 aa29.44■■■□□ 2.3
COL13A1-213ENST00000520267 SKILP12757 684 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 BTDP43251 543 aa29.43■■■□□ 2.3
COL13A1-213ENST00000520267 TTC38Q5R3I4 469 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms