RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ETF1P62495 437 aaKnown RBP5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 PAK2Q13177 524 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 PPM1JQ5JR12 505 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 SLITRK4Q8IW52 837 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 REXO1Q8N1G1 1221 aaKnown RBP5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 RASGRP4Q8TDF6 673 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 FBLIM1Q8WUP2 373 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 GPRASP2Q96D09 838 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 MISP3Q96FF7 219 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 SEMA6CQ9H3T2 930 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 SSU72Q9NP77 194 aaKnown RBP5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 PRKAG2Q9UGJ0 569 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 ADAM30Q9UKF2 790 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 PRAMEF27A3QJZ7 478 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 TLR3O15455 904 aaKnown RBP5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 RNGTTO60942 597 aaKnown RBP5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 NEFMP07197 916 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 RNASE1P07998 156 aaKnown RBP5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 NFICP08651 508 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 HCLS1P14317 486 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 RAB6AP20340 208 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 GRK4P32298 578 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 NTF4P34130 210 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 CAP2P40123 477 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 CRKP46108 304 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 CDK8P49336 464 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 ZNF165P49910 485 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 CYP27A1Q02318 531 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 MLECQ14165 292 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 MLANAQ16655 118 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 SEZ6Q53EL9 994 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 SPRED2Q7Z698 418 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 VPS37DQ86XT2 251 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 HID1Q8IV36 788 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 FBXO27Q8NI29 283 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 ISL2Q96A47 359 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 LRRC4CQ9HCJ2 640 aa5.31□□□□□ -1.56
HMGB1P41-201ENST00000520234 FAM170BA6NMN3 283 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 ATE1O95260 518 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 TMEM201Q5SNT2 666 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 SLC43A3Q8NBI5 491 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 RELTQ969Z4 430 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 SEC16BQ96JE7 1060 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 EHMT1Q9H9B1 1298 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 BRMS1Q9HCU9 246 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 MBNL3Q9NUK0 354 aaKnown RBP5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 POLR3KQ9Y2Y1 108 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 DAGLAQ9Y4D2 1042 aa5.3□□□□□ -1.56
HMGB1P41-201ENST00000520234 HTR3BO95264 441 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 PGRP06401 933 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 IMPDH2P12268 514 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 MCM4P33991 863 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 SLC6A19Q695T7 634 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 SEZ6L2Q6UXD5 910 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 LRRN4CLQ8ND94 238 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 GATA6Q92908 595 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 CAPN10Q9HC96 672 aa5.29□□□□□ -1.56
HMGB1P41-201ENST00000520234 LRIG2O94898 1065 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 PLCG1P19174 1290 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 SOX9P48436 509 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 TNNI2P48788 182 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 YARSP54577 528 aaKnown RBP5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 SYDE1Q6ZW31 735 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 ZSWIM9Q86XI8 627 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 MCATQ8IVS2 390 aaKnown RBP5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 MRPL41Q8IXM3 137 aaKnown RBP5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 TINF2Q9BSI4 451 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 REV1Q9UBZ9 1251 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 PCDHB14Q9Y5E9 798 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 CORINQ9Y5Q5 1042 aa5.28□□□□□ -1.56
HMGB1P41-201ENST00000520234 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 CST3P01034 146 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 HOXA5P20719 270 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 RANGAP1P46060 587 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 CLCQ05315 142 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 SLBPQ14493 270 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 MFSD2AQ8NA29 543 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 FLAD1Q8NFF5 587 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 TMEM87BQ96K49 555 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 FOXQ1Q9C009 403 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 FBRSQ9HAH7 460 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 C1GALT1Q9NS00 363 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 GINM1Q9NU53 330 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 TJP2Q9UDY2 1190 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 ADAMTS6Q9UKP5 1117 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 STRIP2Q9ULQ0 834 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 EFR3BQ9Y2G0 817 aa5.27□□□□□ -1.57
HMGB1P41-201ENST00000520234 ZNF503-AS2A6NEH8 195 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ATF4P18848 351 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ARID5AQ03989 594 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ZNF765Q7L2R6 523 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ARMCX6Q7L4S7 300 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 PI4K2BQ8TCG2 481 aa5.26□□□□□ -1.57
HMGB1P41-201ENST00000520234 ACSF2Q96CM8 615 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms