RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 PLVAPQ9BX97 442 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 PIDD1Q9HB75 910 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 SPC25Q9HBM1 224 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 PCDHB10Q9UN67 800 aa7.63□□□□□ -1.19
HMGB1P46-201ENST00000520062 CCDC163A0A0D9SF12 145 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 AGRPO00253 132 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 UBOX5O94941 541 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 NKG7Q16617 165 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 TMEM67Q5HYA8 995 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 FDX2Q6P4F2 183 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 TMEM192Q8IY95 271 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 ISL2Q96A47 359 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 SLC6A18Q96N87 628 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 KIF2CQ99661 725 aa7.62□□□□□ -1.19
HMGB1P46-201ENST00000520062 ANKRD34BA5PLL1 514 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 FAM86C2PA6NEL3 165 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 GBP1P32455 592 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 PRAMEF13Q5VWM6 474 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 DYMQ7RTS9 669 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 FILIP1Q7Z7B0 1213 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 ZBTB38Q8NAP3 1195 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 C2CD4AQ8NCU7 369 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 IFT57Q9NWB7 429 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 NOP53Q9NZM5 478 aaKnown RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 MKL2Q9ULH7 1088 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 PLAAQ9Y263 795 aa7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 NOP58Q9Y2X3 529 aaKnown RBP7.61□□□□□ -1.19
HMGB1P46-201ENST00000520062 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 ADCY3O60266 1144 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 CLEC3AO75596 197 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 WFS1O76024 890 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 LRIG2O94898 1065 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 ASPAP45381 313 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 GYS2P54840 703 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 IGBP1P78318 339 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 SMYD4Q8IYR2 804 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 SVOPQ8N4V2 548 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 MFSD2AQ8NA29 543 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 PCOLCE2Q9UKZ9 415 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 ACTL7BQ9Y614 415 aa7.6□□□□□ -1.19
HMGB1P46-201ENST00000520062 F8W735 103 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 FAM153BP0C7A2 387 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 DRD2P14416 443 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 SNRPNP63162 240 aaKnown RBP7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 PPFIBP1Q86W92 1011 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 HAUS7Q99871 368 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 DPH2Q9BQC3 489 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 FAM105AQ9NUU6 356 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 COL4A3BPQ9Y5P4 624 aa7.59□□□□□ -1.19
HMGB1P46-201ENST00000520062 RNGTTO60942 597 aaKnown RBP7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 ARHGEF15O94989 841 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 TKFCQ3LXA3 575 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 ARMCX6Q7L4S7 300 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 UBE3DQ7Z6J8 389 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 BAHD1Q8TBE0 780 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 APBA2Q99767 749 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 CWC22Q9HCG8 908 aaKnown RBP7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 SSU72Q9NP77 194 aaKnown RBP7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 SUSD2Q9UGT4 822 aa7.58□□□□□ -1.2
HMGB1P46-201ENST00000520062 ASMTLO95671 621 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 ANAPC15P60006 121 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 RNF4P78317 190 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 HEATR6Q6AI08 1181 aaKnown RBP7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 Q6ZS46 218 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 PPP1R13LQ8WUF5 828 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 CEP41Q9BYV8 373 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 KLHL25Q9H0H3 589 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 GBP3Q9H0R5 595 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 ACSS3Q9H6R3 686 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 PCDH12Q9NPG4 1184 aa7.57□□□□□ -1.2
HMGB1P46-201ENST00000520062 C9IYK1 514 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 EPHX1P07099 455 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 SV2CQ496J9 727 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 TDRD10Q5VZ19 366 aaKnown RBP7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 CCDC144CPQ8IYA2 1237 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 YIPF2Q9BWQ6 316 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 AKTIPQ9H8T0 292 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
HMGB1P46-201ENST00000520062 A0A1W2PQU0 124 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 CBFA2T2O43439 604 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 RFPL3O75679 317 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 TP53P04637 393 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 MASP1P48740 699 aa7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 HSP90AA2PQ14568 343 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
HMGB1P46-201ENST00000520062 AXDND1Q5T1B0 1012 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms