RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 PLCD1P51178 756 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 GABPAQ06546 454 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 GPR142Q7Z601 462 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
POLB-208ENST00000520008 ZNF236Q9UL36 1845 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 VCAM1P19320 739 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
POLB-208ENST00000520008 TTC6Q86TZ1 520 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 TRMT44Q8IYL2 757 aaKnown RBP14.34□□□□□ -0.11
POLB-208ENST00000520008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
POLB-208ENST00000520008 NBPF3Q9H094 633 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 RABGAP1Q9Y3P9 1069 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 RLFQ13129 1914 aa14.34□□□□□ -0.11
POLB-208ENST00000520008 TCRBV5S4A2TA0A5A2 114 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L15C9J2P7 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L11C9JVI0 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L18D6R9N7 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L22D6RA61 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L19D6RCP7 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L20D6RJB6 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 COL6A1P12109 1028 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 PDE6AP16499 860 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 RGS2P41220 211 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 USP14P54578 494 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 EVX2Q03828 476 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 CACNB2Q08289 660 aaPredicted RBP14.33□□□□□ -0.12
POLB-208ENST00000520008 USP17L24Q0WX57 530 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 PDE3AQ14432 1141 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 TTF1Q15361 905 aaPredicted RBP14.33□□□□□ -0.12
POLB-208ENST00000520008 CCL14Q16627 93 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 ABCB5Q2M3G0 1257 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 CATSPERGQ6ZRH7 1159 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 PLEKHH3Q7Z736 793 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 SIRT2Q8IXJ6 389 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 APBA2Q99767 749 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 GDF15Q99988 308 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 PAGR1Q9BTK6 254 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 PFASO15067 1338 aa14.33□□□□□ -0.12
POLB-208ENST00000520008 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
POLB-208ENST00000520008 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
POLB-208ENST00000520008 ZYXQ15942 572 aaKnown RBP14.32□□□□□ -0.12
POLB-208ENST00000520008 SLC9C2Q5TAH2 1124 aa14.32□□□□□ -0.12
POLB-208ENST00000520008 LHX8Q68G74 356 aa14.32□□□□□ -0.12
POLB-208ENST00000520008 FEZ1Q99689 392 aa14.32□□□□□ -0.12
POLB-208ENST00000520008 C11orf49Q9H6J7 331 aa14.32□□□□□ -0.12
POLB-208ENST00000520008 PARP14Q460N5 1801 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 MYH8P13535 1937 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 SPDYE16A6NNV3 312 aaPredicted RBP14.31□□□□□ -0.12
POLB-208ENST00000520008 SOX1O00570 391 aaPredicted RBP14.31□□□□□ -0.12
POLB-208ENST00000520008 IGHA2P01877 340 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 CCND3P30281 292 aaPredicted RBP14.31□□□□□ -0.12
POLB-208ENST00000520008 BMP8BP34820 402 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 MAP2K5Q13163 448 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
POLB-208ENST00000520008 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 BTBD7Q9P203 1132 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 STAP2Q9UGK3 403 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 ZNF532Q9HCE3 1301 aa14.31□□□□□ -0.12
POLB-208ENST00000520008 A0A1W2PRG0 241 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 HOXC6P09630 235 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 CCNA1P78396 465 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 GRB14Q14449 540 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 SEPT2Q15019 361 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 C7orf61Q8IZ16 206 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 CLASRPQ8N2M8 674 aaKnown RBP14.3□□□□□ -0.12
POLB-208ENST00000520008 LCORLQ8N3X6 602 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
POLB-208ENST00000520008 CABP5Q9NP86 173 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
POLB-208ENST00000520008 FLRT1Q9NZU1 646 aa14.3□□□□□ -0.12
POLB-208ENST00000520008 MYH7P12883 1935 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 GOLIM4O00461 696 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 PTPREP23469 700 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 EDC3Q96F86 508 aaKnown RBP14.29□□□□□ -0.12
POLB-208ENST00000520008 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
POLB-208ENST00000520008 MCM9Q9NXL9 1143 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 DDX19BQ9UMR2 479 aa14.29□□□□□ -0.12
POLB-208ENST00000520008 BAZ2AQ9UIF9 1905 aaKnown RBP14.29□□□□□ -0.12
POLB-208ENST00000520008 POLR3DP05423 398 aaPredicted RBP14.28□□□□□ -0.12
POLB-208ENST00000520008 MS4A1P11836 297 aa14.28□□□□□ -0.12
POLB-208ENST00000520008 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
POLB-208ENST00000520008 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
POLB-208ENST00000520008 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
POLB-208ENST00000520008 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
POLB-208ENST00000520008 RAB11FIP3O75154 756 aa14.27□□□□□ -0.13
POLB-208ENST00000520008 HMMRO75330 724 aa14.27□□□□□ -0.13
POLB-208ENST00000520008 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
POLB-208ENST00000520008 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms