RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 NAPBQ9H115 298 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 KANSL2Q9H9L4 492 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 ZFYVE28Q9HCC9 887 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 HTTP42858 3142 aa13.75□□□□□ -0.21
SPIDR-212ENST00000519661 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 AKR1B1P15121 316 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 SEPT2Q15019 361 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 TAF1CQ15572 869 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-212ENST00000519661 COL13A1Q5TAT6 717 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-212ENST00000519661 CCDC84Q86UT8 332 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-212ENST00000519661 ZNF296Q8WUU4 475 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-212ENST00000519661 LPAR1Q92633 364 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 MKL1Q969V6 931 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 DIAPH3Q9NSV4 1193 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
SPIDR-212ENST00000519661 A0A1W2PRG0 241 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 SGSM2O43147 1006 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 FKTNO75072 461 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 HMGCS2P54868 508 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.21
SPIDR-212ENST00000519661 MTMR2Q13614 643 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 NEDD1Q8NHV4 660 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 IL25Q9H293 177 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
SPIDR-212ENST00000519661 GNRH1P01148 92 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 APPP05067 770 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 SLC3A2P08195 630 aaKnown RBP13.72□□□□□ -0.21
SPIDR-212ENST00000519661 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-212ENST00000519661 PDE4BQ07343 736 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 PKN2Q16513 984 aaKnown RBP13.72□□□□□ -0.21
SPIDR-212ENST00000519661 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
SPIDR-212ENST00000519661 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
SPIDR-212ENST00000519661 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 NBPF3Q9H094 633 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 SH2D4AQ9H788 454 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 MORF4L1Q9UBU8 362 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
SPIDR-212ENST00000519661 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 SP3Q02447 781 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 ICA1Q05084 483 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 FAM110CQ1W6H9 321 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 CTU1Q7Z7A3 348 aaKnown RBP13.71□□□□□ -0.21
SPIDR-212ENST00000519661 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 TCP11L1Q9NUJ3 509 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
SPIDR-212ENST00000519661 LAMA4Q16363 1823 aa13.71□□□□□ -0.22
SPIDR-212ENST00000519661 MINDY4BA8MYZ0 360 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 VCAM1P19320 739 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-212ENST00000519661 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 ERO1AQ96HE7 468 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 ASCC2Q9H1I8 757 aaPredicted RBP13.7□□□□□ -0.22
SPIDR-212ENST00000519661 VCPKMTQ9H867 229 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 MTMR4Q9NYA4 1195 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L15C9J2P7 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L13C9JLJ4 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L11C9JVI0 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L18D6R9N7 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L22D6RA61 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L17D6RBQ6 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L19D6RCP7 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L20D6RJB6 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 USP17L24Q0WX57 530 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 MAP4K1Q92918 833 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
SPIDR-212ENST00000519661 ARHGEF10LQ9HCE6 1279 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
SPIDR-212ENST00000519661 MYH8P13535 1937 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 A0A0G2JMZ2 1700 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
SPIDR-212ENST00000519661 CYP2C8P10632 490 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 EEF2P13639 858 aaKnown RBP13.68□□□□□ -0.22
SPIDR-212ENST00000519661 PRMT2P55345 433 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 CAP1Q01518 475 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 GADL1Q6ZQY3 521 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SPIDR-212ENST00000519661 GMCL1P1Q8NEA9 526 aa13.68□□□□□ -0.22
SPIDR-212ENST00000519661 CASP8AP2Q9UKL3 1982 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 RLFQ13129 1914 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
SPIDR-212ENST00000519661 TTLL1O95922 423 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 OSBPP22059 807 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 HERVK_113P62684 666 aa13.67□□□□□ -0.22
SPIDR-212ENST00000519661 DGKZQ13574 1117 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms