RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 ANP32CO43423 234 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 DCXO43602 365 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 NPM3O75607 178 aaKnown RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 MAP4K4O95819 1239 aaPredicted RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 FGBP02675 491 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 SLC4A2P04920 1241 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 ZNF853P0CG23 659 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 PUM3Q15397 648 aaKnown RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 PKN1Q16512 942 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 ERICH6BQ5W0A0 696 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 ANO1Q5XXA6 986 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 ZNF365Q70YC5 407 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 DZIP1Q86YF9 867 aaKnown RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 KHSRPQ92945 711 aaKnown RBP eCLIP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 HERC5Q9UII4 1024 aaKnown RBP6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 PCDHA11Q9Y5I1 949 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 MTCH2Q9Y6C9 303 aa6.16□□□□□ -1.42
AC055854.1-202ENST00000519624 BDP1A6H8Y1 2624 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L15C9J2P7 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L13C9JLJ4 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L11C9JVI0 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 GFRA3O60609 400 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 CSF2RAP15509 400 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 PRDX5P30044 214 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 FLIIQ13045 1269 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 WDR43Q15061 677 aaKnown RBP eCLIP6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 FAM47AQ5JRC9 791 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 USP17L2Q6R6M4 530 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 CCDC146Q8IYE0 955 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 C8orf58Q8NAV2 365 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 TRPV1Q8NER1 839 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 NPLOC4Q8TAT6 608 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 GLT1D1Q96MS3 346 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 TRIM34Q9BYJ4 488 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 UPF3BQ9BZI7 483 aaKnown RBP6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 IL23AQ9NPF7 189 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 TBX21Q9UL17 535 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 DENND2AQ9ULE3 1009 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 FAM50BQ9Y247 325 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 SLC4A7Q9Y6M7 1214 aa6.15□□□□□ -1.42
AC055854.1-202ENST00000519624 SALL1Q9NSC2 1324 aa6.15□□□□□ -1.43
AC055854.1-202ENST00000519624 LOC285556D6RIA3 1793 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 DOCK1Q14185 1865 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 GRM8O00222 908 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 SEMA3EO15041 775 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 ADORA2AP29274 412 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 USP14P54578 494 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 TMEM67Q5HYA8 995 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 SPTY2D1Q68D10 685 aaPredicted RBP6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 FAM178BQ8IXR5 827 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 RPUSD2Q8IZ73 545 aaKnown RBP6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 LPIN2Q92539 896 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 FAM163AQ96GL9 167 aaPredicted RBP6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 PUS3Q9BZE2 481 aaKnown RBP6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 LMCD1Q9NZU5 365 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 YBX2Q9Y2T7 364 aaKnown RBP6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 GAKO14976 1311 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 ELP1O95163 1332 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 RFX7Q2KHR2 1363 aa6.14□□□□□ -1.43
AC055854.1-202ENST00000519624 PLXNB2O15031 1838 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 CACNA1AO00555 2505 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 FAM196BA6NMK8 535 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ZBBXA8MT70 800 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 KIF28PB7ZC32 967 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 PEX10O60683 326 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 IGHA2P01877 340 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ACRP10323 421 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 AKR1A1P14550 325 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ATP2A2P16615 1042 aaKnown RBP6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 BTDP43251 543 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ACLYP53396 1101 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 SAMD1Q6SPF0 538 aaPredicted RBP6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ATF7IPQ6VMQ6 1270 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 LBX2Q6XYB7 198 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 C16orf59Q7L2K0 433 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 OTOP2Q7RTS6 562 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ABRAQ8N0Z2 381 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 PCSK9Q8NBP7 692 aaKnown RBP6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 VTI1AQ96AJ9 217 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 FEZ1Q99689 392 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 DHX36Q9H2U1 1008 aaKnown RBP6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 SPC25Q9HBM1 224 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 PI4KBQ9UBF8 816 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 ZNF536O15090 1300 aa6.13□□□□□ -1.43
AC055854.1-202ENST00000519624 MROH7-TTC4A0A0A0MT08 1334 aa6.12□□□□□ -1.43
AC055854.1-202ENST00000519624 A0A0U1RQG5 324 aaPredicted RBP6.12□□□□□ -1.43
AC055854.1-202ENST00000519624 POTEB3A0JP26 581 aa6.12□□□□□ -1.43
AC055854.1-202ENST00000519624 LRRC37A2A6NM11 1700 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms