RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 APOBEC3FQ8IUX4 373 aaKnown RBP17.44■□□□□ 0.38
PABPC1-210ENST00000519363 RGS22Q8NE09 1264 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 MYL10Q9BUA6 226 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
PABPC1-210ENST00000519363 FAM217BQ9NTX9 383 aaPredicted RBP17.44■□□□□ 0.38
PABPC1-210ENST00000519363 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
PABPC1-210ENST00000519363 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
PABPC1-210ENST00000519363 IFNAR1P17181 557 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 SYT1P21579 422 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 LMOD1P29536 600 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-210ENST00000519363 CDC27P30260 824 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 NTRK3Q16288 839 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 PNMA1Q8ND90 353 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 TRPM4Q8TD43 1214 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 CEP95Q96GE4 821 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 TMEM39BQ9GZU3 492 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 MTMR4Q9NYA4 1195 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 HACL1Q9UJ83 578 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 WDR90Q96KV7 1748 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
PABPC1-210ENST00000519363 STX6O43752 255 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
PABPC1-210ENST00000519363 TOP1P11387 765 aaKnown RBP17.42■□□□□ 0.38
PABPC1-210ENST00000519363 RXRAP19793 462 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 PKP1Q13835 747 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 RASA3Q14644 834 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 CERKLQ49MI3 558 aaPredicted RBP17.42■□□□□ 0.38
PABPC1-210ENST00000519363 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
PABPC1-210ENST00000519363 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 ADARB2Q9NS39 739 aaKnown RBP17.42■□□□□ 0.38
PABPC1-210ENST00000519363 STX8Q9UNK0 236 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 ZDHHC9Q9Y397 364 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 PPP2R3BQ9Y5P8 575 aa17.42■□□□□ 0.38
PABPC1-210ENST00000519363 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
PABPC1-210ENST00000519363 ADD1P35611 737 aaKnown RBP17.41■□□□□ 0.38
PABPC1-210ENST00000519363 EPS15P42566 896 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 TMEM179Q6ZVK1 233 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 TEPSINQ96N21 525 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.41■□□□□ 0.38
PABPC1-210ENST00000519363 MYH15Q9Y2K3 1946 aa17.41■□□□□ 0.38
PABPC1-210ENST00000519363 DOCK1Q14185 1865 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 TTLL1O95922 423 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 FDPSP14324 419 aaKnown RBP17.4■□□□□ 0.38
PABPC1-210ENST00000519363 KIF5BP33176 963 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 GRM4Q14833 912 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 LARP1BQ659C4 914 aaKnown RBP17.4■□□□□ 0.38
PABPC1-210ENST00000519363 CLEC17AQ6ZS10 378 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-210ENST00000519363 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
PABPC1-210ENST00000519363 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 MTMR6Q9Y217 621 aa17.4■□□□□ 0.38
PABPC1-210ENST00000519363 ASTN2O75129 1339 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-210ENST00000519363 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-210ENST00000519363 ZSCAN22P10073 491 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-210ENST00000519363 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
PABPC1-210ENST00000519363 TMTC3Q6ZXV5 915 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 DEFB129Q9H1M3 183 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 KANSL2Q9H9L4 492 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 GGA3Q9NZ52 723 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 NYAP2Q9P242 653 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 ORC3Q9UBD5 711 aaPredicted RBP17.39■□□□□ 0.37
PABPC1-210ENST00000519363 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
PABPC1-210ENST00000519363 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
PABPC1-210ENST00000519363 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
PABPC1-210ENST00000519363 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
PABPC1-210ENST00000519363 HIRAP54198 1017 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-210ENST00000519363 FUT2Q10981 343 aa17.38■□□□□ 0.37
PABPC1-210ENST00000519363 CDAN1Q8IWY9 1227 aa17.38■□□□□ 0.37
PABPC1-210ENST00000519363 TRIM22Q8IYM9 498 aa17.38■□□□□ 0.37
PABPC1-210ENST00000519363 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-210ENST00000519363 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 GNAQP50148 359 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 WASF1Q92558 559 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 MKL1Q969V6 931 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 LZTS2Q9BRK4 669 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 CABP5Q9NP86 173 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 PAPPA2Q9BXP8 1791 aa17.37■□□□□ 0.37
PABPC1-210ENST00000519363 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-210ENST00000519363 GDF11O95390 407 aa17.36■□□□□ 0.37
PABPC1-210ENST00000519363 DEXIO95424 95 aa17.36■□□□□ 0.37
PABPC1-210ENST00000519363 F13A1P00488 732 aa17.36■□□□□ 0.37
PABPC1-210ENST00000519363 ICA1Q05084 483 aa17.36■□□□□ 0.37
PABPC1-210ENST00000519363 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
PABPC1-210ENST00000519363 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
PABPC1-210ENST00000519363 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
PABPC1-210ENST00000519363 PHKBQ93100 1093 aa17.36■□□□□ 0.37
PABPC1-210ENST00000519363 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms